Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2593 |
Symbol | flgF |
ID | 5078282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3014505 |
End bp | 3015248 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499776 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_001184113 |
Protein GI | 146293689 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACAAAT TCCTATATAT CTCCATGAGT GGGGCTAAGC AAAATATGCA TGAGTTGGCC TTACGAGGCA ATAACTTAGC CAATGCGAAT ACCGATGGCT TTAAGTCTGA TATGGCGCAG GCAAGATCAA TGCAAGCCTT TGGAGAAGGA TTACCAACAC GGGTGTTTGC CATGATCGAA ACTCCGTCTG CTAATTTTCG TTCAGGCCCA ATTAAGACGA CAGGACGAGA TCTTGACGTT GCCATTAAGG GCGATGGTTG GTTTGCTGTG CAGGCAAAAG ATGGGGCAGA GGCTTATACC CGCTCTGGCA GCTTGAGTTT TGATGCGACA GGTCTCTTGC ATAACGACCG AGGTAATCCG GTGATGGGAG ATGCCGGGCC AATTGTACTG CCGTTACCCA TAGATAAAGT GACTATTTCC CAGGATGGGA TTATTTCTGT TCGTCCTCAA GGTGCTACCG CAGAGGTTAT CGAAGAGGTT GGCAGACTTA AACTGGTCAA TCCTGGTAAT GCCCAGATGA TGCGTGGCGA AGATGGTTTA TTCAGACTTG TGTCAGGTAA CGATGCTCCA GCAGACCCTA ATGTTGCCGT GGAAAGTGGT GCAGTAGAAG GCAGTAACGT CAATCCAGTC GATGAGATGG TGTCTTTGAT TGAATTACAA CGTCAGTTTG AAATGCAAGT CAAGATGATG AAAACCGCGG AAGAAATTGA CCGTGCTTCA TCTTCATTAA TGCGTATTAG TTAG
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Protein sequence | MDKFLYISMS GAKQNMHELA LRGNNLANAN TDGFKSDMAQ ARSMQAFGEG LPTRVFAMIE TPSANFRSGP IKTTGRDLDV AIKGDGWFAV QAKDGAEAYT RSGSLSFDAT GLLHNDRGNP VMGDAGPIVL PLPIDKVTIS QDGIISVRPQ GATAEVIEEV GRLKLVNPGN AQMMRGEDGL FRLVSGNDAP ADPNVAVESG AVEGSNVNPV DEMVSLIELQ RQFEMQVKMM KTAEEIDRAS SSLMRIS
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