Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2588 |
Symbol | |
ID | 5078277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3008776 |
End bp | 3010701 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499771 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_001184108 |
Protein GI | 146293684 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTG ACCTATTAAA TATTGCACGT ACTGGTGTGC TTGCCTCTCA ATCGCAGCTA GGGGTAACCA GTAATAACAT TGCTAACGCG AATACCGCAG GCTATCACAG ACAAGTGGCA ACTCAGTCAA CGCTGGAGTC GCAACGCTTT GGTAATAGTT TTTATGGTAC AGGGACTTAC GTTGATGACG TAAAGCGTAT CTACAATGAT TATGCGGCAA GAGAATTACG CATTGGGCAA ACAACCTTAA GTGGCGCAGA AGCAAGCTAC GGCAAACTCA GTGAGCTCGA TCAACTGTTT TCTCAAATCG GTAAAATGGT TCCTCAGAGT TTAAATTCTC TGTTTACTGG ATTAAACAGT CTCGCGGATT TACCCGCTGA CTTAGGTATT CGTAGTTCAA CTCTAAACGA TGCTAAACAA TTGGCTAATA GTTTGAATCA GATGCAATCG AGCTTAAATG GCCAACTGAC GCAAACCAAT GATCAGATCA CTGGGATGAC TAAGCGTATC AATGAGATTA GTAAGGAGTT GGCTAATTTA AATCTCGAGC TGATGAAATC GCCAAATCAA GACGCCATCT TACTTGATAA GCAAGATGCA CTCGTTCAGG AGCTAAGCCA ATATGCTCAA GTGAATGTTA TTCCTCAAGA TAATGGTGCG AAAAGTATTA TGTTGGGCGG CTCGGTGATG TTGGTCTCTG GTGAGATTGC CATGACGATG GATACTAAAA CCGGTAATCC ATTCCCCAAT GAGTTGCAAT TGATGTCAAG TATTGGTTCG CAAAGTGTCT CTGCCGATCC GAGCAAATTA GGTGGGCAAT TAGGTGCGCT GTTTGAATAC CGTGATCAAA CGTTAATTCC TGCAAGCCAC GAGCTCGATC AGTTGGCCCT GGGGATTGCT GATAACTTCA ACAAAATGCA GCAACAAGGA TTAGATCTAA ATGGCCAAGT GGGAGCGAAT ATCTTTAGAG ATATTAATGA TCCTTTAATG TCATTGGGTC GTGTTGGTGG CTATTCAAAC AATACTGGTA ACGCAACCTT AGGCGTGAAT ATTGATGATA CTCGTTTATT AACGGGTGGC TCATATGAGT TATCTTTTAC TGCGCCGGCC TCCTATGAAC TAAGGGATAC AGAAACAGGG GTAATTACAC CACTGACGTT AAATGGCTCG ACCTTAGAAG GCGGTGCAGG ATTTTCTATT AATATTAAAG CTGGGGCAAT GGCTTCTGGT GATCGATTCG CTATTCGACC AACTGCTGGC GCAGCTAATG GTATTACGGT TGAAATGACG GATCCTAAAG GTATTGCCGC CGCTTCGCCA AAAATAACTG CTGACGCCGC GAACTCAGGT AATACCCAAG TTAAGTTGAC GCAAATTACG AATCGCAGTG CAGCCAATTT TCCTATTACT GGCAGTGAAT TGACGATCCA GCTCGATACC ACCGCGATAC CTCCAACCTA TGAAGCATTT GATGCCTCCG GAACCTCCCT TGGCGCTGCC GCTCCTTATA CTCCCCCAAG TATCAGTGCC TTTGGTTTTA CCTTTGAAGT TGATAGTACC GCAGCCGCCA GTAATGACAG ATTTACCTTT AACTTAGCCT TTGCTGAAGG CGACAACTCT AACGCCGTTG CTATGGCCAA ATTGAGTGAA AGTAAAGTGA TGAATGGGGG GAAGTCAACC TTAGCGGATG TATTTGAAAA TACAAAAATT GACATAGGCA GTAAGACAAA AGCGGCCGAA GTGCGTGTAG GGTCTGCAGA GGCTATTTAC CAACAAGCCT ATGCCAGAGT AGAAAGCGAA TCGGGCGTCA ACTTAGATGA AGAAGCCGCC AATTTAATGC GTTTTCAACA AGCTTATCAA GCCTCAGCCC GTATCATGAC TACGGCACAA CAAATTTTTG ACACCCTATT AACTTCAGTG CGTTAG
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Protein sequence | MAIDLLNIAR TGVLASQSQL GVTSNNIANA NTAGYHRQVA TQSTLESQRF GNSFYGTGTY VDDVKRIYND YAARELRIGQ TTLSGAEASY GKLSELDQLF SQIGKMVPQS LNSLFTGLNS LADLPADLGI RSSTLNDAKQ LANSLNQMQS SLNGQLTQTN DQITGMTKRI NEISKELANL NLELMKSPNQ DAILLDKQDA LVQELSQYAQ VNVIPQDNGA KSIMLGGSVM LVSGEIAMTM DTKTGNPFPN ELQLMSSIGS QSVSADPSKL GGQLGALFEY RDQTLIPASH ELDQLALGIA DNFNKMQQQG LDLNGQVGAN IFRDINDPLM SLGRVGGYSN NTGNATLGVN IDDTRLLTGG SYELSFTAPA SYELRDTETG VITPLTLNGS TLEGGAGFSI NIKAGAMASG DRFAIRPTAG AANGITVEMT DPKGIAAASP KITADAANSG NTQVKLTQIT NRSAANFPIT GSELTIQLDT TAIPPTYEAF DASGTSLGAA APYTPPSISA FGFTFEVDST AAASNDRFTF NLAFAEGDNS NAVAMAKLSE SKVMNGGKST LADVFENTKI DIGSKTKAAE VRVGSAEAIY QQAYARVESE SGVNLDEEAA NLMRFQQAYQ ASARIMTTAQ QIFDTLLTSV R
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