Gene Sputcn32_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2588 
Symbol 
ID5078277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3008776 
End bp3010701 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content44% 
IMG OID640499771 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_001184108 
Protein GI146293684 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTG ACCTATTAAA TATTGCACGT ACTGGTGTGC TTGCCTCTCA ATCGCAGCTA 
GGGGTAACCA GTAATAACAT TGCTAACGCG AATACCGCAG GCTATCACAG ACAAGTGGCA
ACTCAGTCAA CGCTGGAGTC GCAACGCTTT GGTAATAGTT TTTATGGTAC AGGGACTTAC
GTTGATGACG TAAAGCGTAT CTACAATGAT TATGCGGCAA GAGAATTACG CATTGGGCAA
ACAACCTTAA GTGGCGCAGA AGCAAGCTAC GGCAAACTCA GTGAGCTCGA TCAACTGTTT
TCTCAAATCG GTAAAATGGT TCCTCAGAGT TTAAATTCTC TGTTTACTGG ATTAAACAGT
CTCGCGGATT TACCCGCTGA CTTAGGTATT CGTAGTTCAA CTCTAAACGA TGCTAAACAA
TTGGCTAATA GTTTGAATCA GATGCAATCG AGCTTAAATG GCCAACTGAC GCAAACCAAT
GATCAGATCA CTGGGATGAC TAAGCGTATC AATGAGATTA GTAAGGAGTT GGCTAATTTA
AATCTCGAGC TGATGAAATC GCCAAATCAA GACGCCATCT TACTTGATAA GCAAGATGCA
CTCGTTCAGG AGCTAAGCCA ATATGCTCAA GTGAATGTTA TTCCTCAAGA TAATGGTGCG
AAAAGTATTA TGTTGGGCGG CTCGGTGATG TTGGTCTCTG GTGAGATTGC CATGACGATG
GATACTAAAA CCGGTAATCC ATTCCCCAAT GAGTTGCAAT TGATGTCAAG TATTGGTTCG
CAAAGTGTCT CTGCCGATCC GAGCAAATTA GGTGGGCAAT TAGGTGCGCT GTTTGAATAC
CGTGATCAAA CGTTAATTCC TGCAAGCCAC GAGCTCGATC AGTTGGCCCT GGGGATTGCT
GATAACTTCA ACAAAATGCA GCAACAAGGA TTAGATCTAA ATGGCCAAGT GGGAGCGAAT
ATCTTTAGAG ATATTAATGA TCCTTTAATG TCATTGGGTC GTGTTGGTGG CTATTCAAAC
AATACTGGTA ACGCAACCTT AGGCGTGAAT ATTGATGATA CTCGTTTATT AACGGGTGGC
TCATATGAGT TATCTTTTAC TGCGCCGGCC TCCTATGAAC TAAGGGATAC AGAAACAGGG
GTAATTACAC CACTGACGTT AAATGGCTCG ACCTTAGAAG GCGGTGCAGG ATTTTCTATT
AATATTAAAG CTGGGGCAAT GGCTTCTGGT GATCGATTCG CTATTCGACC AACTGCTGGC
GCAGCTAATG GTATTACGGT TGAAATGACG GATCCTAAAG GTATTGCCGC CGCTTCGCCA
AAAATAACTG CTGACGCCGC GAACTCAGGT AATACCCAAG TTAAGTTGAC GCAAATTACG
AATCGCAGTG CAGCCAATTT TCCTATTACT GGCAGTGAAT TGACGATCCA GCTCGATACC
ACCGCGATAC CTCCAACCTA TGAAGCATTT GATGCCTCCG GAACCTCCCT TGGCGCTGCC
GCTCCTTATA CTCCCCCAAG TATCAGTGCC TTTGGTTTTA CCTTTGAAGT TGATAGTACC
GCAGCCGCCA GTAATGACAG ATTTACCTTT AACTTAGCCT TTGCTGAAGG CGACAACTCT
AACGCCGTTG CTATGGCCAA ATTGAGTGAA AGTAAAGTGA TGAATGGGGG GAAGTCAACC
TTAGCGGATG TATTTGAAAA TACAAAAATT GACATAGGCA GTAAGACAAA AGCGGCCGAA
GTGCGTGTAG GGTCTGCAGA GGCTATTTAC CAACAAGCCT ATGCCAGAGT AGAAAGCGAA
TCGGGCGTCA ACTTAGATGA AGAAGCCGCC AATTTAATGC GTTTTCAACA AGCTTATCAA
GCCTCAGCCC GTATCATGAC TACGGCACAA CAAATTTTTG ACACCCTATT AACTTCAGTG
CGTTAG
 
Protein sequence
MAIDLLNIAR TGVLASQSQL GVTSNNIANA NTAGYHRQVA TQSTLESQRF GNSFYGTGTY 
VDDVKRIYND YAARELRIGQ TTLSGAEASY GKLSELDQLF SQIGKMVPQS LNSLFTGLNS
LADLPADLGI RSSTLNDAKQ LANSLNQMQS SLNGQLTQTN DQITGMTKRI NEISKELANL
NLELMKSPNQ DAILLDKQDA LVQELSQYAQ VNVIPQDNGA KSIMLGGSVM LVSGEIAMTM
DTKTGNPFPN ELQLMSSIGS QSVSADPSKL GGQLGALFEY RDQTLIPASH ELDQLALGIA
DNFNKMQQQG LDLNGQVGAN IFRDINDPLM SLGRVGGYSN NTGNATLGVN IDDTRLLTGG
SYELSFTAPA SYELRDTETG VITPLTLNGS TLEGGAGFSI NIKAGAMASG DRFAIRPTAG
AANGITVEMT DPKGIAAASP KITADAANSG NTQVKLTQIT NRSAANFPIT GSELTIQLDT
TAIPPTYEAF DASGTSLGAA APYTPPSISA FGFTFEVDST AAASNDRFTF NLAFAEGDNS
NAVAMAKLSE SKVMNGGKST LADVFENTKI DIGSKTKAAE VRVGSAEAIY QQAYARVESE
SGVNLDEEAA NLMRFQQAYQ ASARIMTTAQ QIFDTLLTSV R