Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2585 |
Symbol | |
ID | 5078274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3005553 |
End bp | 3006368 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499768 |
Product | flagellin domain-containing protein |
Protein accession | YP_001184105 |
Protein GI | 146293681 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATTA CAGTAAACAC TAACGTAACA TCTTTAAAAG CACAGAAAAA CCTAAATACT TCAGCGAGCG GTTTGGCCAC TTCCATGGAA CGTTTATCCA GTGGTCTGCG TATTAACGGT GCAAAGGACG ATGCGGCAGG TTTAGCAATT TCTAACCGCT TAAATAGCCA AGTCCGTGGC TTAGATGTGG GTATGCGTAA CGCTAACGAT GCTATCTCTA TCGCCCAAAT TTCTGAAGGT GCGATGCAAG AACAAACTAA CATGCTGCAA CGTATGCGTG ACTTAACCGT CCAAGCAGAA AACGGTGCTA ATAGTTCAGA TGACTTAACG TCAATACAAA AAGAGATCGA TCAGTTAGCA TTAGAAATCA CAGCAATCGG TACAAATACG GCCTTTGGTA CTACTAAATT ACTTGATGGC ACTTTCTCTG CTGGTAAGAC TTTCCAAGTA GGGCACCAAT CAGGTGAAGA TATTACGATT TCTGTGTCAA AAACCACTGC ATCAGCATTA AAAGTTGGTA GTTTAGATAT TAAAGGCTCT GCTCGAGCCT CTGCACTGGC TGCGATTGAT GCTGCAATTA AAACCATTGA TAGTCAGCGT GCGGATCTAG GTGCTAAGCA AAACCGCTTA GCCTATAACA TCAGTAATAG TGCTAACACT CAGGCCAACA TTTCTGATGC TAAGAGTCGT ATTGTGGATG TGGATTTTGC GAAAGAAACA TCGCAAATGA CCAAGAACCA AGTATTGCAA CAAACGGGTT CTGCTATGTT AGCCCAAGCT AACCAATTAC CTCAAGTGGC CTTATCACTG CTGTAA
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Protein sequence | MAITVNTNVT SLKAQKNLNT SASGLATSME RLSSGLRING AKDDAAGLAI SNRLNSQVRG LDVGMRNAND AISIAQISEG AMQEQTNMLQ RMRDLTVQAE NGANSSDDLT SIQKEIDQLA LEITAIGTNT AFGTTKLLDG TFSAGKTFQV GHQSGEDITI SVSKTTASAL KVGSLDIKGS ARASALAAID AAIKTIDSQR ADLGAKQNRL AYNISNSANT QANISDAKSR IVDVDFAKET SQMTKNQVLQ QTGSAMLAQA NQLPQVALSL L
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