Gene Sputcn32_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2580 
Symbol 
ID5078269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3001120 
End bp3002553 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content43% 
IMG OID640499763 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_001184100 
Protein GI146293676 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAAA CAGATCAACG AATTTTACTT GTCGGAACCC CATCAGAGCG CCTAAGTCGC 
CTGTGTTGCA TATTTGAATT TTTAGGTGAG CAAATAGATG TTATTGCTCC CGAAAAATTA
AATTCTTATC TCCAAGATAC TCGTTATCGT GCTTTGGTTC TCTTTACTGA TACCATGCCA
AGTGATGCAA TAAAATTGCT TGCGACCCAG TTCGCGTGGC AACCGATATT ATTGTTTGGC
GAGATAGGTG ATTTTCAAGT ATCCAATGTG CTTGGACAAA TTGAAGAACC CTTAAGCTAT
CCCCAACTGA CGGAACTGCT ACACTTTTGC CAAGTTTACG GCCAAGTTAA ACGTCCTCAA
GTACCTACAA GTGCTAATCA AACTAAGCTT TTTAGAAGTT TAGTTGGACG TAGTGATGGA
ATTGCTCATG TAAGGCACTT GATCAATCAG GTCGCAACCT CTGATGCAAC AGTGTTGGTG
TTAGGCCAGT CTGGTACGGG TAAAGAGGTC GTTGCTCGTA ATATTCATTA TCTTTCTGAA
CGTCGTGATG GTCCTTTTAT TCCCGTTAAC TGTGGCGCTA TTCCTCCTGA ATTACTCGAA
AGTGAACTTT TTGGTCATGA AAAAGGTTCA TTTACAGGGG CCATTTGTTC CCGTAAAGGA
CGTTTTGAAT TAGCTGAAGG TGGCACGCTG TTTCTTGATG AAATCGGTGA TATGCCCTTA
CAGATGCAAG TTAAATTGCT ACGTGTGTTG CAAGAGCGAG TTTTTGAACG AGTGGGTGGA
ACTAAGACGA TTAACGTGGA TGTTCGAGTC GTCGCGGCTA CCCATAGGGA TCTAGAGAGC
ATGATCAGCG GTAATGAATT CCGTGAGGAC CTTTACTATC GCCTTAATGT TTTCCCTATC
GAAATGCCCG CCTTAAGCGA GCGTAAAGAC GATGTACCTT TGTTGCTACA GGAGCTGGTG
AGCCGTGTAT ATAATGAGGG ACGTGGTAAA GTGCGCTTTA CCCAACGCGC AATAGAATCG
TTAAAGGAAC ATGCATGGTC TGGCAACGTT CGAGAGTTAT CTAACTTAGT TGAGCGACTC
ACCATTTTAT ATCCAGGTGG TTTGGTTGAT GTTAACGATC TGCCCGTTAA ATATCGCCAT
ATTGATGTGC CCGAATACTG CGTAGAAATG AGTGAAGAAC AACAGGAGCG TGATGCCTTA
GCGTCCATTT TTTCGAGTGA AGAACCCGTT GAAATTCCTG AAACACGTTT TCCAAATGAG
CTACCTCCTG AGGGAGTTAA CCTTAAAGAT TTGTTGGCAG AGCTTGAAAT TGACATGATA
CGTCAAGCAC TTGAGTTGCA GGATAATGTT GTTGCTCGAG CGGCTGAAAT GTTAGGGATT
CGCCGTACAA CCTTAGTTGA AAAAATGCGG AAATACGGAA TGACAAAAGA ATAG
 
Protein sequence
MMQTDQRILL VGTPSERLSR LCCIFEFLGE QIDVIAPEKL NSYLQDTRYR ALVLFTDTMP 
SDAIKLLATQ FAWQPILLFG EIGDFQVSNV LGQIEEPLSY PQLTELLHFC QVYGQVKRPQ
VPTSANQTKL FRSLVGRSDG IAHVRHLINQ VATSDATVLV LGQSGTGKEV VARNIHYLSE
RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAICSRKG RFELAEGGTL FLDEIGDMPL
QMQVKLLRVL QERVFERVGG TKTINVDVRV VAATHRDLES MISGNEFRED LYYRLNVFPI
EMPALSERKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL
TILYPGGLVD VNDLPVKYRH IDVPEYCVEM SEEQQERDAL ASIFSSEEPV EIPETRFPNE
LPPEGVNLKD LLAELEIDMI RQALELQDNV VARAAEMLGI RRTTLVEKMR KYGMTKE