Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2580 |
Symbol | |
ID | 5078269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3001120 |
End bp | 3002553 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499763 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001184100 |
Protein GI | 146293676 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAAA CAGATCAACG AATTTTACTT GTCGGAACCC CATCAGAGCG CCTAAGTCGC CTGTGTTGCA TATTTGAATT TTTAGGTGAG CAAATAGATG TTATTGCTCC CGAAAAATTA AATTCTTATC TCCAAGATAC TCGTTATCGT GCTTTGGTTC TCTTTACTGA TACCATGCCA AGTGATGCAA TAAAATTGCT TGCGACCCAG TTCGCGTGGC AACCGATATT ATTGTTTGGC GAGATAGGTG ATTTTCAAGT ATCCAATGTG CTTGGACAAA TTGAAGAACC CTTAAGCTAT CCCCAACTGA CGGAACTGCT ACACTTTTGC CAAGTTTACG GCCAAGTTAA ACGTCCTCAA GTACCTACAA GTGCTAATCA AACTAAGCTT TTTAGAAGTT TAGTTGGACG TAGTGATGGA ATTGCTCATG TAAGGCACTT GATCAATCAG GTCGCAACCT CTGATGCAAC AGTGTTGGTG TTAGGCCAGT CTGGTACGGG TAAAGAGGTC GTTGCTCGTA ATATTCATTA TCTTTCTGAA CGTCGTGATG GTCCTTTTAT TCCCGTTAAC TGTGGCGCTA TTCCTCCTGA ATTACTCGAA AGTGAACTTT TTGGTCATGA AAAAGGTTCA TTTACAGGGG CCATTTGTTC CCGTAAAGGA CGTTTTGAAT TAGCTGAAGG TGGCACGCTG TTTCTTGATG AAATCGGTGA TATGCCCTTA CAGATGCAAG TTAAATTGCT ACGTGTGTTG CAAGAGCGAG TTTTTGAACG AGTGGGTGGA ACTAAGACGA TTAACGTGGA TGTTCGAGTC GTCGCGGCTA CCCATAGGGA TCTAGAGAGC ATGATCAGCG GTAATGAATT CCGTGAGGAC CTTTACTATC GCCTTAATGT TTTCCCTATC GAAATGCCCG CCTTAAGCGA GCGTAAAGAC GATGTACCTT TGTTGCTACA GGAGCTGGTG AGCCGTGTAT ATAATGAGGG ACGTGGTAAA GTGCGCTTTA CCCAACGCGC AATAGAATCG TTAAAGGAAC ATGCATGGTC TGGCAACGTT CGAGAGTTAT CTAACTTAGT TGAGCGACTC ACCATTTTAT ATCCAGGTGG TTTGGTTGAT GTTAACGATC TGCCCGTTAA ATATCGCCAT ATTGATGTGC CCGAATACTG CGTAGAAATG AGTGAAGAAC AACAGGAGCG TGATGCCTTA GCGTCCATTT TTTCGAGTGA AGAACCCGTT GAAATTCCTG AAACACGTTT TCCAAATGAG CTACCTCCTG AGGGAGTTAA CCTTAAAGAT TTGTTGGCAG AGCTTGAAAT TGACATGATA CGTCAAGCAC TTGAGTTGCA GGATAATGTT GTTGCTCGAG CGGCTGAAAT GTTAGGGATT CGCCGTACAA CCTTAGTTGA AAAAATGCGG AAATACGGAA TGACAAAAGA ATAG
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Protein sequence | MMQTDQRILL VGTPSERLSR LCCIFEFLGE QIDVIAPEKL NSYLQDTRYR ALVLFTDTMP SDAIKLLATQ FAWQPILLFG EIGDFQVSNV LGQIEEPLSY PQLTELLHFC QVYGQVKRPQ VPTSANQTKL FRSLVGRSDG IAHVRHLINQ VATSDATVLV LGQSGTGKEV VARNIHYLSE RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAICSRKG RFELAEGGTL FLDEIGDMPL QMQVKLLRVL QERVFERVGG TKTINVDVRV VAATHRDLES MISGNEFRED LYYRLNVFPI EMPALSERKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL TILYPGGLVD VNDLPVKYRH IDVPEYCVEM SEEQQERDAL ASIFSSEEPV EIPETRFPNE LPPEGVNLKD LLAELEIDMI RQALELQDNV VARAAEMLGI RRTTLVEKMR KYGMTKE
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