Gene Sputcn32_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2577 
Symbol 
ID5078266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2998040 
End bp2998375 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content45% 
IMG OID640499760 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001184097 
Protein GI146293673 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.325302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAG GCGCAAATAC ATTTCTGCAA GAAATGCAGT CACTCAAAGG TGAAATAACA 
CCGTCTTTCG GTATCTCACC GAATATCATG CAGCAGGTAA ATAACACCAG TGGTGCCGAT
TTCGGTCAGC TACTCTCGCA GGCTGTTGGC AATGTCAGCG GCTTACAATC AACGTCATCA
AACTTGGCAA CGCGATTAGA GATGGGTGAC ACGACAGTGA GCTTGTCGGA TACTGTGATT
GCCAGAGAGA AAGCCAGTGT GGCATTTGAA GCGACGGTAC AAGTGCGTAA TAAACTTGTC
GAAGCTTATA AAGAAATAAT GAGTATGCCT GTTTAG
 
Protein sequence
MQIGANTFLQ EMQSLKGEIT PSFGISPNIM QQVNNTSGAD FGQLLSQAVG NVSGLQSTSS 
NLATRLEMGD TTVSLSDTVI AREKASVAFE ATVQVRNKLV EAYKEIMSMP V