Gene Sputcn32_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2572 
Symbol 
ID5078261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2992569 
End bp2993012 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content42% 
IMG OID640499755 
Productflagellar export protein FliJ 
Protein accessionYP_001184092 
Protein GI146293668 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2882] Flagellar biosynthesis chaperone 
TIGRFAM ID[TIGR02473] flagellar export protein FliJ 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATG CAGATCCCTT ATTACTGGTA CTTAATTTAG CGCTTGATGC TGAAGAGCAA 
GCTTCGCTCC TACTGAAATC GGCCCAATTA GAATGTCAAA AACGCCAACA TCAGCTCAAT 
GCCTTAAACA ACTATCGTTT AGATTACATG AAGCAAATGC AGTCTCAGCA AGGTCAAGCG 
ATTAGCGCAA GTCATTATCA CCAATTTCAT CGTTTTATTC GTCAGATTGA TGATGCCATA 
GCCCAACAAA ACCGGGTGGT GGCTGATGGC GAAAAGCAAA AAGAGTATCG TCAGCACCAT 
TGGCTAGAAA AACAAAAGAA GCGCAAGGCA GTCGAACTGC TTCTCGCTAA TAAAGCGAAA 
AAACGTGATG CATTAGAATT GAAAAGAGAG CAGAAAATGA CCGATGAATT TGCATCTCAA 
CAGTTTTACC GCCGACATAA ATAG
 
Protein sequence
MANADPLLLV LNLALDAEEQ ASLLLKSAQL ECQKRQHQLN ALNNYRLDYM KQMQSQQGQA 
ISASHYHQFH RFIRQIDDAI AQQNRVVADG EKQKEYRQHH WLEKQKKRKA VELLLANKAK 
KRDALELKRE QKMTDEFASQ QFYRRHK