Gene Sputcn32_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2567 
Symbol 
ID5078256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2988408 
End bp2988827 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content43% 
IMG OID640499750 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_001184087 
Protein GI146293663 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAT CGGTAATATT CAGTTTAATG CCTGTTACGC AGGCTAATGC CGTGGGATTA 
GTTACCGACA CTTCTACTGC GGTAGTCGCA TCAACTGCCA AAATGTCAGA ACCATCTCAA
CTTGCCACTG CGGCGAGTAT GCTTGGTGGC TTGATCCTCG TATTATTGCT TATCTTCGCC
TTAGCCTATT TGTTAAGGCG ATTTAATTTA GTTCAAACAA ATCATAATGT GCTTAAGACC
CTCGCGGTGA CTTCACTTGG ACAAAAAGAA CGGCTAGTGC TTGTTCAAGT TGGAGAGCAG
CAATATTTAC TTGGGGTGAG TGCACAACAA GTGAATTTGA TTGATAAATT AGCCGAGCCC
ATCCAAGTGG AATCTGATTC CTTTGCGAAT CGCTTACGTC AGGCGAAATT AAAACAATGA
 
Protein sequence
MSTSVIFSLM PVTQANAVGL VTDTSTAVVA STAKMSEPSQ LATAASMLGG LILVLLLIFA 
LAYLLRRFNL VQTNHNVLKT LAVTSLGQKE RLVLVQVGEQ QYLLGVSAQQ VNLIDKLAEP
IQVESDSFAN RLRQAKLKQ