| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2557 |
|---|
| Symbol | |
|---|
| ID | 5078246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2979068 |
|---|
| End bp | 2979805 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640499740 |
|---|
| Product | chemotaxis phosphatase, CheZ |
|---|
| Protein accession | YP_001184077 |
|---|
| Protein GI | 146293653 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3143] Chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.91816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAC ATACATCAGG GCTCATCACG CTAGAGCAGG CTCAGCATTT AGTTGAATTA
CTAAGTGCAG GTGAACAGTC TCAAGCTGAT GATTTATTTA GAGAACTTGC AGCTCCACTT
CAGAGGGAAC TCTTCGACGA GGTAGGTAAG CTCACTCGAC AACTTCATAG TGCATTGATG
GATTTTCAGG TCGATAATCG TTTAGTTCAG TTGGCGAATA CTGACATACC TGATGCGAAA
CAAAGATTAA ACTATGTTAT TGATATGACA GAGCAAGCTG CGAATAAAAC CATGGATGCA
GTTGAGGAAT GTTTGCCATT AGCAAATGCC TTAACGACAA ATATTCAGCA GGTTATGCCA
TCTTGGGATA GGTTAATGCG GCGAGACATT GCATTAACTG AGTTTAAAGC CCTATGCCAT
GATGTGCAGC ACTTAATGTT GCGCAGTGAG CAAGATTCTG ATCGATTACG TGATTTGCTT
AATCAAATAT TGATGGCGCA GGATTTTCAA GATCTCACCG GACAAATGAT CCGCCGTGTT
ATCGATTTAG TAATGGAAGT TGAAAGTAAC TTGGTATCAA TGCTGACGGT ATTTGGTGAG
CAACCAATAA TTGAGCACCA GGTTATTCAG AAAAATAATA TTGAAGCAGA AGGCCCGATA
ATGAATGCCG AGCTTCGTCA AGATGTGGTA ACGGGTCAAG ACGAAGTAGA TGATCTTCTA
TCGAGTCTAG GTTTCTAA
|
|---|
| Protein sequence | MKSHTSGLIT LEQAQHLVEL LSAGEQSQAD DLFRELAAPL QRELFDEVGK LTRQLHSALM
DFQVDNRLVQ LANTDIPDAK QRLNYVIDMT EQAANKTMDA VEECLPLANA LTTNIQQVMP
SWDRLMRRDI ALTEFKALCH DVQHLMLRSE QDSDRLRDLL NQILMAQDFQ DLTGQMIRRV
IDLVMEVESN LVSMLTVFGE QPIIEHQVIQ KNNIEAEGPI MNAELRQDVV TGQDEVDDLL
SSLGF
|
|---|
| |