Gene Sputcn32_2537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2537 
Symbol 
ID5080881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2954600 
End bp2955148 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content38% 
IMG OID640499720 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001184057 
Protein GI146293633 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TTGATACAAA AATTCCAGAC GTAAAAATTA TTGAACCTAA AGTATTTGGT 
GATGAGCGCG GTTTTTTCTT TGAAAGCTTT AATCAGCAGC AATTTGAAGC AGCAGTAGGC 
TATTCAGTCA AATTCGTCCA GGACAATCAC TCCAAATCTA GCAAAGGGGT ATTACGTGGG 
TTGCACTATC AATTACCTCC TTATGCTCAA GGTAAGTTAG TACGTTGTGT GGTAGGTGAG 
GTCTTCGATG TGGCTGTAGA TATTCGCAAA AGTTCACCAA CTTTTGGTCA GTGGGTGGGT 
ATACATTTAT CTGCGGAAAA TAAACGCCAA TTATGGATCC CTTCGGGATT TGCACATGGA 
TTTGTTACTT TAACTGAAAC AGCAGAATTT TTGTATAAGA CAACTAATTT CTATGCACCG 
CAGAGTGAAG GTTCAATATG TTGGGATGAT ACTGATATCG GAATTGAATG GCCTTTAGTA 
GATAAACCTA GTTTGTCATC AAAAGACCAA ATGTCCTCGT TGTTGATCAA TGCAACAACA 
TTTGAATAA
 
Protein sequence
MKIIDTKIPD VKIIEPKVFG DERGFFFESF NQQQFEAAVG YSVKFVQDNH SKSSKGVLRG 
LHYQLPPYAQ GKLVRCVVGE VFDVAVDIRK SSPTFGQWVG IHLSAENKRQ LWIPSGFAHG 
FVTLTETAEF LYKTTNFYAP QSEGSICWDD TDIGIEWPLV DKPSLSSKDQ MSSLLINATT 
FE