Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2528 |
Symbol | |
ID | 5080872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2945858 |
End bp | 2946412 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640499711 |
Product | sugar transferase |
Protein accession | YP_001184048 |
Protein GI | 146293624 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGTT TAATTGATTT ACTTGCAGCC TTTTTCGGGT TGCTATTGCT ATGGCCAATA TTATTCATCG TAACCATCAT CGGTTTGTTT GATACAGGCT CACCGATTTT TATTCAAACT CGGGTAGGTA AACATAGAAA GCCATTTAAG TTGATTAAGT TTCGTACTAT GAGTAAGGAT ACGGCATCGG TTGCGAGCCA TCTTGCCAGT AATGCTGCCA TTACAAAATT TGGCGGTTTT TTACGCAAAA CTAAAATTGA TGAACTGCCA CAACTGATTA ATGTACTAAA AGGTGAAATG AGTTTGGTTG GCCCACGGCC TAACTTATTT AACCAAGAAG AGTTGATAGC CGAGCGTGAT GCATTAGGGG TTTATGATGT GTTACCAGGT GTGACAGGTT TAGCGCAAGT ACAAAATATT GATATGTCCA CGCCTAAGTT GCTTGCTCAA ACGGATAAGC AAATGATAGA TACTTTAACC TTAGGTCGTT ATTTTAAATA CATCCTAATG ACGGCTACTG GCCGTGGTAG TGGTGATGCT GTTAAGCCAA GTTAG
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Protein sequence | MMRLIDLLAA FFGLLLLWPI LFIVTIIGLF DTGSPIFIQT RVGKHRKPFK LIKFRTMSKD TASVASHLAS NAAITKFGGF LRKTKIDELP QLINVLKGEM SLVGPRPNLF NQEELIAERD ALGVYDVLPG VTGLAQVQNI DMSTPKLLAQ TDKQMIDTLT LGRYFKYILM TATGRGSGDA VKPS
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