| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2518 |
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| Symbol | |
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| ID | 5080862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2931085 |
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| End bp | 2932800 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640499701 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001184038 |
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| Protein GI | 146293614 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.468149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCA GCAAGTACCT GCTATCAACA CAAAAAGAAA CTCCTGCCAA TGCAGAGGTC
ATTAGTCATC AATTAATGTT ACGTGCGGGC ATGATCCGTC GTAATGCGTC TGGCCTTTAC
AGCTATCTCC CCACGGGCTT ACGTGTACTA CGAAAAGTCG AAGCGATTGT TCGTGAAGAA
ATGAACAAAG CCGGAGCGAT TGAAATTCTA ATGCCGATGG TACAACCGGC TGATTTGTGG
GTAGAAACGG GTCGTTGGGA CAAATTTGGT CCAGAGCTAC TGCGCTTTAA AGATCGTCAC
AATCGCGACT TCGTACTGGG GCCAACCCAT GAAGAAGTGA TCACAGATCT CATTCGTAAA
GAAGTCAGCT CATATAAGCA ATTACCACTG AACCTTTACC AAATTCAAAC CAAATTCCGT
GACGAAGTTC GTCCACGTTT TGGCATGATG CGCTCACGCG AATTCTTGAT GAAAGACGCC
TACTCTTTCC ACCTTGACGT CGATACCATG AATGAAACCT ATGAGGCTAT GTACACAGCC
TATAGCAACA TTCTATCGCG CATGGGCTTA GCTTTCCGCC CAGTTTTAGC TGATACGGGT
TCAATCGGTG GCAGCATGTC ACACGAGTTC CATGTTCTAG CACAAAGCGG TGAAGATTTA
ATTGCTTACT CAACGGGCAG CGATTATGCG GCTAACATTG AGAAAGCCGA ATCACCTATG
CCAACCGAAC CACGCGGCGC AGCCACTGAA GCATTGCGTT TAGTCGATAC CCCAAATGCG
AAGACCATTG CGGAATTAGT TGAGCAGTTT GGTTTGGATA TCACTAAAAC GGTCAAAACC
TTGATCGTTA AAGGTGCGAC CGAAGCCGCT CCGCTAGTGG CGTTAATCGT TCGTGGCGAC
CATGAACTCA ACGAAGTCAA AGCCGACAAG TTAGACTTAG TCGCATCACC ATTGGAAATG
GCGCCAGAAG CCCTGATCCG TGACGCCATT GGCGCAGGTC CAGGTTCACT TGGCCCTGTT
GGTCTGAATA TGCCAATCAT TATCGACCAT AGCGTCAGCG TGATGAGCGA TTTTGCAGCC
GGTGCCAACG TGGATGATAA ACACTACTTT GGTATCAACT GGGAGCGCGA TCTGCCACTA
GCCCAAGCGG CCGATATCCG TAACGTGGTT GAAGGTGAAC CCACACCTGA TGGTTTAGGG
ACTTATGCGA TGGCACGCGG TATTGAAGTC GGCCATATCT TCCAACTCGG CACTAACTAC
TCTAAATCAA TGAATGCCAC GGTTCTTGAT GAAAACGGTA AATCTCAGGT ATTGCTGATG
GGTTGCTACG GTGTTGGCGT GAGCCGTATT GTAGCCGCTG CGATTGAGCA AAACTTTGAT
GACCGCGGCA TTGTATGGCC AGAAGCGATT GCGCCGTTCA GTGTGGGCAT TTTACCTATG
AATATGCACA AGTCGCACCG CGTCACCGAT ATCGCCGAGC AGTTATACAA AGACTTAAGC
GCAGCAGGTA TCGAAGTGTT ATTGGATGAT CGTAAAGAGC GCCCAGGCGT GATGTTCGCC
GATATGGAAC TGATTGGTAT CCCACACACT GTGGTGATTG GCGATCGCAA TATCGATGCG
GGCGTATTTG AATACAAAAA CCGCCGCACA GGTGAGAAAC AAGATATTCC GTTCGATCAA
CTTGTTGATT TCCTGAAAAA TGCGGTTAAA AGCTAA
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| Protein sequence | MRVSKYLLST QKETPANAEV ISHQLMLRAG MIRRNASGLY SYLPTGLRVL RKVEAIVREE
MNKAGAIEIL MPMVQPADLW VETGRWDKFG PELLRFKDRH NRDFVLGPTH EEVITDLIRK
EVSSYKQLPL NLYQIQTKFR DEVRPRFGMM RSREFLMKDA YSFHLDVDTM NETYEAMYTA
YSNILSRMGL AFRPVLADTG SIGGSMSHEF HVLAQSGEDL IAYSTGSDYA ANIEKAESPM
PTEPRGAATE ALRLVDTPNA KTIAELVEQF GLDITKTVKT LIVKGATEAA PLVALIVRGD
HELNEVKADK LDLVASPLEM APEALIRDAI GAGPGSLGPV GLNMPIIIDH SVSVMSDFAA
GANVDDKHYF GINWERDLPL AQAADIRNVV EGEPTPDGLG TYAMARGIEV GHIFQLGTNY
SKSMNATVLD ENGKSQVLLM GCYGVGVSRI VAAAIEQNFD DRGIVWPEAI APFSVGILPM
NMHKSHRVTD IAEQLYKDLS AAGIEVLLDD RKERPGVMFA DMELIGIPHT VVIGDRNIDA
GVFEYKNRRT GEKQDIPFDQ LVDFLKNAVK S
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