Gene Sputcn32_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2517 
Symbol 
ID5080861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2930221 
End bp2930850 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID640499700 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001184037 
Protein GI146293613 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.467085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCGC CAACACCTAC ATCAAAACCT GATTATCAAA GCCAACATAA AAAGCGCCTG 
TCTTGGATGC CCTGGCTGTA TTTTTCATTA AAAGAAAAAC ACTTAGTCTG GGCAAAGCCT 
TGGCAAGATC AAGTACAAGC GGCTCTTTGT GCCCTCGAAA CAGTCACCAT AGGTGATAAC 
TGTTTTATTG CCCCCGAGGC ACAGTTATTT GCCGAACCAA ATCGCGACAT CAATATCGGC 
GATCGCTGCA TGATTGCCGC CGAGTGTTTT TTACATGGGC CTATCACTTT AGGGAATGAA 
GTCGCGATTA ATCATGGCTG CTCCTTCGAT GGTGGTCGAG TGGGAATTCA GATTGGTGAC 
CAAACTCGCA TTGCCAACAA TGTCACCATC TATGCCTTTA ACCACGGCAT GGCACCAGAT 
ACACCTATAT ATCAACAAGC CGCCAACTCC AAAGGCATTG TTATAGGCAA AGATGTGTGG 
ATTGGCGCGC AGGCTGGGAT AGTCGATGGT GTGACCATTG GCGATCACGC CGTGGTCGGA 
ATGGGCAGCA TCGTGACTAA AAATGTGCCC AACTGGGCTA TTGTCGCTGG CAATCCTGCA 
CGCGTGATTG GCGATAGGCG GGATAAGTAA
 
Protein sequence
MSAPTPTSKP DYQSQHKKRL SWMPWLYFSL KEKHLVWAKP WQDQVQAALC ALETVTIGDN 
CFIAPEAQLF AEPNRDINIG DRCMIAAECF LHGPITLGNE VAINHGCSFD GGRVGIQIGD 
QTRIANNVTI YAFNHGMAPD TPIYQQAANS KGIVIGKDVW IGAQAGIVDG VTIGDHAVVG 
MGSIVTKNVP NWAIVAGNPA RVIGDRRDK