Gene Sputcn32_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2506 
Symbol 
ID5080850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2914298 
End bp2914876 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content40% 
IMG OID640499689 
Productthymidine kinase 
Protein accessionYP_001184026 
Protein GI146293602 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCACAAC TGTATTTTTA CTATTCGTCA ATGAATGCGG GCAAATCCAC GTCATTATTG 
CAATCTTCTT ATAATTATCG CGAACGTGGT ATGCATACCT TAGTGATGAC AGCCTCTATT 
GATGATAGAT ATGGCAAAGG TAAAGTGGCC TCCCGTATTG GTATTGAAAC GGATGCACAG 
GTTTTTAGTA GCCAAGATAA TCTGACTGAA ATGATCCAAG CCGTGCATCA AGTTACGCCA 
TTAAGTTGTG TTTTATTGGA CGAATGCCAG TTCTTAAGTA AAGAACAAGT AAAACAGTTG 
ACTTATGTTG TTGATAAGCT AGATATTCCA GTGTTGTGCT ATGGGCTGCG AACAGACTTT 
CAAGGTGAAC TTTTTAGTGG TAGTCATTAT TTGTTGGCTT GGGCCGATAA GTTAGTCGAG 
TTAAAGACGA TTTGTCATTG TGGACGTAAA GCAAATATGG TGGTTCGTCT TGATGATGAA 
GGTAAAGTGA TGCGTGAAGG TGAGCAAGTG GCTATCGGTG GTAATGAGCG TTATGAATCA 
GTGTGTCGCA AGCATTTTCG TGAATTTATC TGGGATTAG
 
Protein sequence
MAQLYFYYSS MNAGKSTSLL QSSYNYRERG MHTLVMTASI DDRYGKGKVA SRIGIETDAQ 
VFSSQDNLTE MIQAVHQVTP LSCVLLDECQ FLSKEQVKQL TYVVDKLDIP VLCYGLRTDF 
QGELFSGSHY LLAWADKLVE LKTICHCGRK ANMVVRLDDE GKVMREGEQV AIGGNERYES 
VCRKHFREFI WD