Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2504 |
Symbol | |
ID | 5080848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2909638 |
End bp | 2911017 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499687 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001184024 |
Protein GI | 146293600 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCGC CCAATTCAAT CCAAGACTAT TCAGTACTTA TCATCGATGA TGAGCCACAT ATAGGCACCG TCTTAGTGCA ATTGTTCGAA CTAGAAGGTA TTAAAGCCAT CACTCGCACT GAACCTAAAG ATATTGCCAA ACTGCTTGAT AAAGATTGGG CCGGAGTAGT GATCTCCGAT GTGAATATGC CACAGCTTGA TGGCATTAGT CTTATGCAAC AAATTCGCCA GCAAGATCCT GATTTACCTG TAGTCCTACT CACAGGTTTT GGCGATATCG CCATGGCAGT CAATGCGTTA AAACAAGGCG CTTACGATTT TCTCGAAAAA CCCTTTAATA ATGAACATAT GCTCGATGTG GTTAAACGTG CCTTAGATAA ACGCAGTTTG ACCCTAGAAA ACCGTAAACT AAAAAAAGAG CTAGAGAGCC AAAGCGTTCC AGGGCCACGT ATTTTGGGGC ACAGTGTTGG CATTAACCGT ATGCGCCATA TTATCGAACA AGTCATCAAT ACGCCTGCTG ACGTATTGAT TGAAGGAGAA ACAGGCACAG GTAAAGAACT CGTTGCCCGT TATCTGCACG ATCACAGCAA CCGTAACCAA GCCAACTTTG TGGCCATTAA CTGCGGCGCG ATCCCTGAAA ATCTTATCGA AAGTGAACTC TTTGGCGCCG AAGCTGGTGC CTTTACGGGG GTCGATAAAA TGCGGGTGGG TAAGTTTGAA TACGCTAATG GTGGCACACT GTTTTTGGAT GAAATTGAAA GTACACCACT CTCGCTCCAA GTGAAACTAC TCAGAGTGTT AGAAGATCGT AAAGTTGAAC GCTTAGGTTC CAATAAAAGC ATCAATTTAG ATATACGTGT GATTGCCGCC ACCAAAGTTG ATTTAAAAAG CCTGTGTGAT ACTGGGGAGT TTCGTCAAGA TTTACTCTAC CGCTTGAATC TAGTGACGGT TCCCATTCCG CCACTAAGGG ATCGACGTGA AGATATTCCC CTACTCTTTT TACATTTTGC GCGAGTCGCA TCGGCTCGAT ATCACAAAGC ACTTATCGCG TTAAATGCTG AGCAAAATGC CATACTCACC TCACACGACT GGCCGGGCAA TGTACGTGAA TTACGTAATC TGGCTGAACG CTATGTACTA CTCGGTGGAG AAGCCGCTTT TGCCGGTTCA CTTGGCAATA CACCAAGTCT GCACTCCAGC ATGTCTTTAC TGCAACGGGT CGAGTTTTTC GAGCGTGTAC TGATTGAGGA AGCCTTAAGC CACAACAAAG GCAGTATCAA ACTGACGATG GAACAGCTTG AACTCCCTCG CAAAACCTTA TATGACAAGA TGCGCAAATA TGATTTAGAC CGCAAGCAGT ATGTAAATTC AGAGGACTAG
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Protein sequence | MNAPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKAITRT EPKDIAKLLD KDWAGVVISD VNMPQLDGIS LMQQIRQQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHMLDV VKRALDKRSL TLENRKLKKE LESQSVPGPR ILGHSVGINR MRHIIEQVIN TPADVLIEGE TGTGKELVAR YLHDHSNRNQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKMRVGKFE YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS INLDIRVIAA TKVDLKSLCD TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARVA SARYHKALIA LNAEQNAILT SHDWPGNVRE LRNLAERYVL LGGEAAFAGS LGNTPSLHSS MSLLQRVEFF ERVLIEEALS HNKGSIKLTM EQLELPRKTL YDKMRKYDLD RKQYVNSED
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