Gene Sputcn32_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2504 
Symbol 
ID5080848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2909638 
End bp2911017 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content45% 
IMG OID640499687 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001184024 
Protein GI146293600 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCGC CCAATTCAAT CCAAGACTAT TCAGTACTTA TCATCGATGA TGAGCCACAT 
ATAGGCACCG TCTTAGTGCA ATTGTTCGAA CTAGAAGGTA TTAAAGCCAT CACTCGCACT
GAACCTAAAG ATATTGCCAA ACTGCTTGAT AAAGATTGGG CCGGAGTAGT GATCTCCGAT
GTGAATATGC CACAGCTTGA TGGCATTAGT CTTATGCAAC AAATTCGCCA GCAAGATCCT
GATTTACCTG TAGTCCTACT CACAGGTTTT GGCGATATCG CCATGGCAGT CAATGCGTTA
AAACAAGGCG CTTACGATTT TCTCGAAAAA CCCTTTAATA ATGAACATAT GCTCGATGTG
GTTAAACGTG CCTTAGATAA ACGCAGTTTG ACCCTAGAAA ACCGTAAACT AAAAAAAGAG
CTAGAGAGCC AAAGCGTTCC AGGGCCACGT ATTTTGGGGC ACAGTGTTGG CATTAACCGT
ATGCGCCATA TTATCGAACA AGTCATCAAT ACGCCTGCTG ACGTATTGAT TGAAGGAGAA
ACAGGCACAG GTAAAGAACT CGTTGCCCGT TATCTGCACG ATCACAGCAA CCGTAACCAA
GCCAACTTTG TGGCCATTAA CTGCGGCGCG ATCCCTGAAA ATCTTATCGA AAGTGAACTC
TTTGGCGCCG AAGCTGGTGC CTTTACGGGG GTCGATAAAA TGCGGGTGGG TAAGTTTGAA
TACGCTAATG GTGGCACACT GTTTTTGGAT GAAATTGAAA GTACACCACT CTCGCTCCAA
GTGAAACTAC TCAGAGTGTT AGAAGATCGT AAAGTTGAAC GCTTAGGTTC CAATAAAAGC
ATCAATTTAG ATATACGTGT GATTGCCGCC ACCAAAGTTG ATTTAAAAAG CCTGTGTGAT
ACTGGGGAGT TTCGTCAAGA TTTACTCTAC CGCTTGAATC TAGTGACGGT TCCCATTCCG
CCACTAAGGG ATCGACGTGA AGATATTCCC CTACTCTTTT TACATTTTGC GCGAGTCGCA
TCGGCTCGAT ATCACAAAGC ACTTATCGCG TTAAATGCTG AGCAAAATGC CATACTCACC
TCACACGACT GGCCGGGCAA TGTACGTGAA TTACGTAATC TGGCTGAACG CTATGTACTA
CTCGGTGGAG AAGCCGCTTT TGCCGGTTCA CTTGGCAATA CACCAAGTCT GCACTCCAGC
ATGTCTTTAC TGCAACGGGT CGAGTTTTTC GAGCGTGTAC TGATTGAGGA AGCCTTAAGC
CACAACAAAG GCAGTATCAA ACTGACGATG GAACAGCTTG AACTCCCTCG CAAAACCTTA
TATGACAAGA TGCGCAAATA TGATTTAGAC CGCAAGCAGT ATGTAAATTC AGAGGACTAG
 
Protein sequence
MNAPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKAITRT EPKDIAKLLD KDWAGVVISD 
VNMPQLDGIS LMQQIRQQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHMLDV
VKRALDKRSL TLENRKLKKE LESQSVPGPR ILGHSVGINR MRHIIEQVIN TPADVLIEGE
TGTGKELVAR YLHDHSNRNQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKMRVGKFE
YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS INLDIRVIAA TKVDLKSLCD
TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARVA SARYHKALIA LNAEQNAILT
SHDWPGNVRE LRNLAERYVL LGGEAAFAGS LGNTPSLHSS MSLLQRVEFF ERVLIEEALS
HNKGSIKLTM EQLELPRKTL YDKMRKYDLD RKQYVNSED