| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2502 |
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| Symbol | |
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| ID | 5080846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2906321 |
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| End bp | 2907718 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499685 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001184022 |
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| Protein GI | 146293598 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTG CAACCCTATT TACCGCCCTA CTCGTCTGTA TGTTTTTAGG CATGCCTATC
GCCATTGCGC TAGGTTTTTC CAGCATGCTC ACCATTTTAT TCTTCTCCAA TGACTCTTTA
GCCTCTATTG CCCTAAAACT CTATGAGTCG TCATCAGAGC ATTACACGCT ACTGGCCATT
CCCTTCTTTA TCCTATCATC AGCCTTTTTA TCAACTGGTG GTGTAGCAAG GCGTATTATT
GACTTTGCCA TGGACAGTAT TGGACATATC CGTGGTGGTC TCGCGATGGC ATCGGTTATG
GCCTGTATGC TGTTTGCTGC GGTTTCAGGA TCATCCCCTG CAACCGTTGC CGCCATTGGT
TCGATAGTGA TCGTTGGTAT GGTAAAAGCG GGTTATCCTG AAAAATTTGC AGCTGGTGTC
ATTACTACCT CAGGCACTCT TGGGATTTTG ATCCCGCCAT CAATTGTGAT GTTAGTGTAT
GCGGCAGCGA CCGAAGTATC AGCAGCAAGA ATGTTTATGG CGGGTTTGAT TCCTGGCTTA
TTAATGGGTT TACTACTCAT GGTAGTCATC TATATCGTTG CCCGTTTTAA AAACCTACCA
TCACGCCCCT TCCCCGGCAT TAAACAATTA GGACTTTCCA GTGCTAAGGC ACTCGGTGGC
TTAGCACTTA TTCTGATAGT TTTAGGTTCC ATTTACGGCG GTATTGCCAG TCCAACTGAA
GCCTCTGCTG TGGCTTGTAT GTATGCTTAT TTGATTGCGG TATTTGGTTA TCGTGATATT
GGGCCGCTGA AAAATGTCGC ATGGCGCAAC TCAGGCGAAA GTCTGCCCAA TGCGATTGCC
CGCAACCTAT GGCATATGAT ATTGGGCTTA ATAAAAACCC CCGTAGATAC TGAAGTACGA
AATGTGGTGC GTGATGGTGC TAAAGTCAGC ATTATGCTGC TGTTTATTAT TGCTAACGCA
ATGCTGTTTG CGCATGTACT TACAACAGAG CGTATACCCC ACATTATCGC CGAATATATT
GTCAGTATGG GTCTACCCGC TTGGGGCTTC CTGATTATCG TCAACTTGTT GCTACTCGCG
GCAGGGAACT TTATGGAGCC GTCTGCGATA GTATTAATTA TGGCGCCGAT CCTATTCCCC
ATTGCGACTC AGTTGGGAAT TGACCCTATT CACTTAGGGA TTATCATGGT GGTGAACATG
GAAATAGGTA TGCTAACGCC GCCTGTTGGA CTCAACCTTT TTGTGACATC GGGGATTACT
GGACGCAGTA TTGGCTGGGT TATCCACTCC GTACTCCCAT GGCTATTGTT GATGCTAGTC
TTCTTAGCCT TTATTACCTA TGTGCCACAA ATATCCCTGT TTTTACCCGA GATGCTGGAT
AAGTTAAGGG GGTATTAG
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| Protein sequence | MAIATLFTAL LVCMFLGMPI AIALGFSSML TILFFSNDSL ASIALKLYES SSEHYTLLAI
PFFILSSAFL STGGVARRII DFAMDSIGHI RGGLAMASVM ACMLFAAVSG SSPATVAAIG
SIVIVGMVKA GYPEKFAAGV ITTSGTLGIL IPPSIVMLVY AAATEVSAAR MFMAGLIPGL
LMGLLLMVVI YIVARFKNLP SRPFPGIKQL GLSSAKALGG LALILIVLGS IYGGIASPTE
ASAVACMYAY LIAVFGYRDI GPLKNVAWRN SGESLPNAIA RNLWHMILGL IKTPVDTEVR
NVVRDGAKVS IMLLFIIANA MLFAHVLTTE RIPHIIAEYI VSMGLPAWGF LIIVNLLLLA
AGNFMEPSAI VLIMAPILFP IATQLGIDPI HLGIIMVVNM EIGMLTPPVG LNLFVTSGIT
GRSIGWVIHS VLPWLLLMLV FLAFITYVPQ ISLFLPEMLD KLRGY
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