| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2484 |
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| Symbol | tgt |
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| ID | 5080901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2883336 |
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| End bp | 2884460 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499652 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001184004 |
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| Protein GI | 146293580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000574895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAGACAC TACCGACGGG CGTGCGCGCC GTGGTCGGTT GATTTTTGAC
CGTGGCACAG TAGAAACCCC CGCTTTTATG CCGGTAGGAA CCTATGGCAC AGTGAAAGGT
ATGACACCTG AAGAAGTGCG TGCCACAGGC GCAGATATTC TGCTCGGTAA CACTTTCCAT
TTATGGCTGC GCCCAGGCGA AGAAATCATG CGTAAGCACG GTGACTTGCA TGATTTTATG
AACTGGCAGC GGCCTATTTT AACGGACTCG GGCGGTTTCC AAGTCTTTAG CCTTGGCGAT
ATCCGTAAAA TTACCGAAGA AGGTGTGCAC TTCCGCTCGC CCATCAACGG TGAGAAAATC
TTCTTAGATC CTGAAAAATC CATGCAAATT CAAGATGCAT TGGGCAGTGA TGTGGTGATG
ATTTTCGACG AATGTACGCC GTATCCCGCC ACCGAAGATG AAGCGCGCAA GTCAATGCAG
ATGTCACTGC GTTGGGCAAA ACGTTCACGC GACGAGTTTG ATCGCTTGAA AAATCCAAAC
TCACTGTTTG GTATTATTCA GGGCGGCGTG TATGAAGATT TACGCGACGA AAGCTTAAAA
GGCTTAGTCG AGATTGGTTT TGACGGTTAT GCCGTCGGTG GTTTGGCTGT AGGTGAACCT
AAAGCAGATA TGCATCGCAT TCTTGAGCAT ATTTGCCCGC AAATTCCTGC AGACAAGCCT
CGCTATCTGA TGGGGGTCGG TAAACCAGAA GATTTAGTTG AAGGTGTACG TCGTGGTGTT
GACATGTTTG ACTGTGTGAT GCCAACCCGT AATGCCCGCA ACGGTCATCT GTTTACGAGT
GAAGGTGTGA TCAAAATACG CAATGCGCGT CATCGAGATG ACACGTCACC ACTTGATACT
AAGTGTGATT GTTATACCTG TAAAAATTAT TCACGGGCGT ACCTTTATCA CTTAGATCGT
TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG
TTAATGGAAG GTTTGCGCGG TGCGATTGAG ACGGGTACAT TAGACGCCTT TGTGGCGGAC
TTCTATACCA GTCAGGGTCG CGAAGTACCA GAGTTAGTCG ATTGA
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| Protein sequence | MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QDALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWAKRSR DEFDRLKNPN
SLFGIIQGGV YEDLRDESLK GLVEIGFDGY AVGGLAVGEP KADMHRILEH ICPQIPADKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDT
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVAD
FYTSQGREVP ELVD
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