| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2483 |
|---|
| Symbol | yajC |
|---|
| ID | 5080900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2882976 |
|---|
| End bp | 2883308 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640499651 |
|---|
| Product | preprotein translocase subunit YajC |
|---|
| Protein accession | YP_001184003 |
|---|
| Protein GI | 146293579 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1862] Preprotein translocase subunit YajC |
|---|
| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000329003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTT CAAATGCATA TGCAAGCGCT GCCGGCGCAC CACAAGGTGG CGGCACGATG
GAACTGATTT TCATGCTGGC GATTTTCGGC CTGATTTTCT ATTTCATGAT TTTCCGTCCG
CAATCAAAAC GCGTTAAAGA GCACAAAAAT CTGATGTCTT CATTAGGCAA AGGCGATGAA
GTGTTAACCA GTGGTGGGAT TTTAGGTAAG ATTGCAAAAA TCAGCGATGA CAGCGATTAC
GTGCTACTGA GCCTTAATGA CACGACGCAA ATCACGATCA AGAAAGACTA TATTGCAGCT
GTATTGCCTA AGGGCTCTAT CCAGTCGTTG TAA
|
|---|
| Protein sequence | MFISNAYASA AGAPQGGGTM ELIFMLAIFG LIFYFMIFRP QSKRVKEHKN LMSSLGKGDE
VLTSGGILGK IAKISDDSDY VLLSLNDTTQ ITIKKDYIAA VLPKGSIQSL
|
|---|
| |