| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2478 |
|---|
| Symbol | |
|---|
| ID | 5080895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2877901 |
|---|
| End bp | 2878446 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640499646 |
|---|
| Product | YaeQ family protein |
|---|
| Protein accession | YP_001183998 |
|---|
| Protein GI | 146293574 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000591787 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCA AATCGACCGT ATTTAAGGTC AACTTACAAA TTGCCGATAT GGATCGGAAT
TATTATCAAG ATCACCAACT GACCCTCGCA CAGCATCCTT CTGAAACTGA TGGGCGTATG
ATGGTACGTT TACTGGCTTT TATCATAAAT GCCAGTGATA CCTTAAGTTT TAGCAAAGGG
CTTTGTGTTG ATGATGAGCC AGAACTATGG GATAAAAGCT TGTCTGGTGA GATCAATTTG
TGGGTTGAAT TTGGTCAGGC TGATGAAAAA TGGCTGAGAA AGGCCAGTGG TCGTGCTAAA
GCGGTGCAAC TCTTTACCTA CGGTGGTCGC AGTGTGCCCA TTTGGTGGAA ACAGAATCAG
CAGGCATTAG AACGCTATCA AAACTTGAAA GTATGGAATA TTGCTGAAGA GTCAGTGACT
GCAATGGAAG CCTTAGTTGG GCGTAATATG GCCTTGCAAG TTTCTATCAG TGAAGGACAG
ATTTGGTTAT CCGATAGTGA AAACAGTGTC CTCATTGAAC CTGAAATCTT AAAAGATCAT
CAGTAA
|
|---|
| Protein sequence | MALKSTVFKV NLQIADMDRN YYQDHQLTLA QHPSETDGRM MVRLLAFIIN ASDTLSFSKG
LCVDDEPELW DKSLSGEINL WVEFGQADEK WLRKASGRAK AVQLFTYGGR SVPIWWKQNQ
QALERYQNLK VWNIAEESVT AMEALVGRNM ALQVSISEGQ IWLSDSENSV LIEPEILKDH
Q
|
|---|
| |