| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2473 |
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| Symbol | |
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| ID | 5080890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2869903 |
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| End bp | 2870925 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499641 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001183993 |
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| Protein GI | 146293569 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000483953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCTA CTTCCCGCGC TTTACTCTTA GTTGTCGCTT TATCAAGCGC ACAAATCCAA
GCGAATACTA TCGAAACCCT TGAAGTATTG AGTAAACCTT ATGCCAATTG GGTGACTTTA
GATGCCACCA TTGAGGCAGT CAAAGCGGCA ACCGTCTCAG CACAAACCTC TGGCCGCATC
ATTAAGCTCA ATTATGATGT CAACGATATC GTTCCCGAGG GGGCTGCACT ACTCGAAATA
ACCAGTAAAG AACAAGGGGC AGAATTGGCC AGCTTTGAAG CTGAACTTGC CAAAGCCAAC
GCCTTAAATA ACGAGGCCCA AGCCCAATAT ACTCGCTACA AAGAGCTCTT TCCAAAAGGC
GCTATCTCTA AAGGTGCGAT GGATGAAGCC ACTGCCAACG CTAAAGCCAC TGAGCAAGCA
GTTAGGGCAG CACAAGCTCG AGTCGTTAAA GCGACTGAAT CATTAAAATA TACCGTAGTA
TCAGCACCTT TTAGCGGCAT AGTGACAGAA CGTTTAGTCC AACTTGGTGA ATCAATCAGC
CCAGGACAAC CGCTACTTTC AGGTTTTTCA CAACATCAAA TGCGGGCAAT AACCCATGTA
CCACAGCGTT ACATCAATCA GCTAAAAGAT GCACCGCAAT TTCGAGTGCA CTTAAGCGAT
GGACGCGAAT TTACCTCAAC GGATCTCACT ATCTTTAGCT TTGCCGATCC CGTAAGTCAC
AGTTATCAAG TGCGAATTAA TTTGCCTAAA GATGAAGCTA ATCTCCAGCC AGGTGTGTGG
GCAAAAGCAA CATTTAAAAA TGGTGAGCGG GAAAAAATCC AATTGCCCAT ATCAGCATTA
CTGACAATGA ATGAACTCAG CAGCGTCTAT CTCAAACAAG GTAACGAATT TGTACTCACC
CAAGTGCGTG TCACCGAACC TGTAGATGGT GAGGTCGAAG TACTGGCGGG ATTAAGATCG
GGTGACAAGG TCGCTGTAGA TGCTTATCAA GTGCTGCTAA ACAAGTCATC TCGCCCTGAG
TGA
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| Protein sequence | MMPTSRALLL VVALSSAQIQ ANTIETLEVL SKPYANWVTL DATIEAVKAA TVSAQTSGRI
IKLNYDVNDI VPEGAALLEI TSKEQGAELA SFEAELAKAN ALNNEAQAQY TRYKELFPKG
AISKGAMDEA TANAKATEQA VRAAQARVVK ATESLKYTVV SAPFSGIVTE RLVQLGESIS
PGQPLLSGFS QHQMRAITHV PQRYINQLKD APQFRVHLSD GREFTSTDLT IFSFADPVSH
SYQVRINLPK DEANLQPGVW AKATFKNGER EKIQLPISAL LTMNELSSVY LKQGNEFVLT
QVRVTEPVDG EVEVLAGLRS GDKVAVDAYQ VLLNKSSRPE
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