Gene Sputcn32_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2462 
Symbol 
ID5078596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2857577 
End bp2858530 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content50% 
IMG OID640499630 
Producthypothetical protein 
Protein accessionYP_001183982 
Protein GI146293558 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA CAGCGCGACT CTCAGCCTCG GTCGATGGCT TGCCGCTTTT TGCCGATGGC 
TTGCATTTAA CCGAGCAAGA GCTGCTGGCG TGCCAAAATA TCGCTCGCGC TATGCCAGAG
CGTTATAGCC GTGCCCGCGC TAACTTAGCG GGCCATCGCA GCAGCTTAAT CAAAGGCCGC
GGAATGGAGT TTGCCGAGGT GCGCCACTAC CAACAGGGCG ACGATGTGCG CACCATTGAT
TGGCGCGTTA CCGCTCGTAC AGGCACAACT CACACTAAAT TATTTGTCGA AGAACGTGAG
CGCCCTATTT TATTGTTAAT CGACCTGAGC CAAAGCCTCT ATTTTGGCTC GAGTTTATTG
CTGCAATCGG TGCAAGCAGG ACACCTTGCG ACCACCTTAG GTTGGAATGC AATTAACCAT
GGCGACAGGC TCGGCGCCTT GATCGCCAGC GAATCTGAGC ATCTAGAGCT CAAACCCCGT
AGCCGTCGCC AAGGCATATT ACAATTGATC TCAGGCCTTT GCCGTGTACA CGAAAATCAG
CTCAATCATA TGGGAAATCA TCAGCGCGAT CCTGATCATA TCCTGCGTGC CTGTCAGCGA
TTACAACGTA TCGCCAAACC CGGCTCCTTG GTTTGGATAG TGACAGATGG CAGCCATTTT
AGCCCCCAAT GTTTAGCCCC CCTAACCGAG CTTAAACGAC ATTGCGATAT GGGTGCCTAC
CTTATTACCG ATCCACTAAG GCAAGGAACC TTGACTTTAC CCAAGCAATT TAGTTTACCG
GTACGCGAAG CAAATCAAGA TCTTGTGTTA ACTCCACATA GCTATCAAGC GTGGCTTTTA
CAACAACAGC GCCAACAGGA TAACTTTGTT GCCATGATGC AAAAATTACG AGTACGCACT
CAACTTATTG ATGCAGCGAT TCCCCTCGCG GGTCAATTAA CCCTATTGCA ATAG
 
Protein sequence
MSDTARLSAS VDGLPLFADG LHLTEQELLA CQNIARAMPE RYSRARANLA GHRSSLIKGR 
GMEFAEVRHY QQGDDVRTID WRVTARTGTT HTKLFVEERE RPILLLIDLS QSLYFGSSLL
LQSVQAGHLA TTLGWNAINH GDRLGALIAS ESEHLELKPR SRRQGILQLI SGLCRVHENQ
LNHMGNHQRD PDHILRACQR LQRIAKPGSL VWIVTDGSHF SPQCLAPLTE LKRHCDMGAY
LITDPLRQGT LTLPKQFSLP VREANQDLVL TPHSYQAWLL QQQRQQDNFV AMMQKLRVRT
QLIDAAIPLA GQLTLLQ