| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2453 |
|---|
| Symbol | |
|---|
| ID | 5078587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2842892 |
|---|
| End bp | 2843422 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640499621 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183973 |
|---|
| Protein GI | 146293549 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG ACGATGACAA AGAAGGCTTG GCGATGTTCT CAGCGCTTAT CGATGGTATT
AAGCCCATCA CTCAGGATAA GCGGCACTTT CGCACGCCCT TAAAAACCAA ACAGGAAATA
GCACTGAAAG AGCAGCAACT GCATGCAAAC AGCTATTTCT CAGATACTTA TCAGCCACTA
CTGCCTATAC AAGGACCGAT GCGTTGGTTA GATGATGGCG TGGATAGCTT AGAGTTAAAA
CGACTCAGAC GTGGCGATTA CCAACCCGAT TTACTGTTGG ATTTGCATGG CTATCGCCAG
TCAGAAGCCA AACTCGAGTT AGTGGCGCTC ATTCAGGCCT GCGTTAAACA ACAGAGCCAA
TGTTGCTGCG TAATGCACGG CTACGGCAGT GGCATATTGA AACAACAAGT TCCCATGTGG
CTAGTACAGC ATCCTATGGT GAAAGCCTTC CATCAGGCGC CAAAAGAATG GGGTGGCGAT
GCCGCACTTT TAGTCTTAAT CGACCTTGGT GAGCTCCCGC ATAGACGTTA G
|
|---|
| Protein sequence | MNKDDDKEGL AMFSALIDGI KPITQDKRHF RTPLKTKQEI ALKEQQLHAN SYFSDTYQPL
LPIQGPMRWL DDGVDSLELK RLRRGDYQPD LLLDLHGYRQ SEAKLELVAL IQACVKQQSQ
CCCVMHGYGS GILKQQVPMW LVQHPMVKAF HQAPKEWGGD AALLVLIDLG ELPHRR
|
|---|
| |