| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2441 |
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| Symbol | truA |
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| ID | 5078575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2826969 |
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| End bp | 2827754 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499609 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001183961 |
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| Protein GI | 146293537 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.238005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATTG CATTAGGTAT TGAATATGAT GGCAGTGGTT ATTTTGGTTG GCAACGTCAG
GCCGAAGTCG ATTCAGTACA AGGGCAATTA GAGCGTGCTT TATCGATAGT GGCAAATGAA
CCAATAGGGT TATTTTGTGC CGGACGTACC GATGCGGGTG TGCATGCCAC AGGCCAAGTG
GTGCATTTTG ATACGAATGC AATCCGAAAT GAAGGCGCTT GGACTTTAGG GGTAAATGCT
AATTTACCTG ATAATATTGC CGTACGTTGG GTCAAGGAAG TCGACGACAG TTTTCATGCG
CGCTTTTCGG CCACCGCCAG ACGCTACCGT TATGTGATTT ATAATCACAG TTTTCGCCCT
GGGATTTTAC GCCATGGTGT AAGCCATTAT CACGGTAATA TTGATGCCGA CAAAATGCAC
CAAGCGGCGC AGGTACTTTT GGGTGAGCAG GATTTTACCA GTTTTCGCGC GGTGCAGTGT
CAGTCGAAAA CACCGTTTCG TAATGTGCAT TGCGTCAATG TTACGCGCCA AGGCATGTAT
GTGATTGTCG ATATCGCCGC CAATGCTTTC TTGCATCATA TGGTGCGTAA TATTGTCGGT
TCATTGTTAG AAATCGGTCT AGGTAATCAG CCACTGACTT GGATGGGTGA TTTGCTCGCG
TTAAAAGATA GAAACCAAGC CGCAGCAACG GCTAAACCCC ATGGACTCTA TCTAGTTGAT
GTGACTTATC CAGAACAATA TCAATTGCCT AAGCTCGCCC TTGGGCCATT ATTTATGTTG
GATTAA
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| Protein sequence | MRIALGIEYD GSGYFGWQRQ AEVDSVQGQL ERALSIVANE PIGLFCAGRT DAGVHATGQV
VHFDTNAIRN EGAWTLGVNA NLPDNIAVRW VKEVDDSFHA RFSATARRYR YVIYNHSFRP
GILRHGVSHY HGNIDADKMH QAAQVLLGEQ DFTSFRAVQC QSKTPFRNVH CVNVTRQGMY
VIVDIAANAF LHHMVRNIVG SLLEIGLGNQ PLTWMGDLLA LKDRNQAAAT AKPHGLYLVD
VTYPEQYQLP KLALGPLFML D
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