Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2435 |
Symbol | |
ID | 5078569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2819934 |
End bp | 2822060 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499603 |
Product | DNA topoisomerase III |
Protein accession | YP_001183955 |
Protein GI | 146293531 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.874224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTCT ATATCGCAGA AAAACCTAGC CTAGGGCGGG CCATTGCCGA TGTATTGCCT AAACCCCATA AAAAAGGCGA TGGATTTATC GAAGCCGCTA ATGGCGATTG CGTGTCTTGG TGTGTCGGTC ACTTGCTCGA ACAAGCAGAA CCTGATGCCT ATAATCCTGA ATTTAAAGCA TGGAAATTTG AGCACTTACC GATAGTGCCA GACAAGTGGC AACTGACACC TAAGGCAGCA ACCCGCAGTC AACTCACTGT GCTTAAACGA TTAGTTAAAC AAGCGAGTAT GCTGGTTAAT GCGGGCGATC CCGACCGTGA AGGGCAGTTA CTCGTGGATG AAGTGATTGC CTATCTTGGT GTGACGGGGG ACAAGCTACA TCAAACCCAG CGTTTACTGA TCAGTGACTT AAACCCACAA GCTGTAAAAC GGGCTCTAAC GCAGCTACGC AGTAATCGCG AATTTATCCC ATTATCTACC TCTGCTTTAG CCCGTAGCCG TGCCGATTGG CTCTATGGTA TGAATATGAC GCGTGCGTAC ACCATCCAAG GTAAAAAGGT CGGTTATCAA GGCGTGTTAT CCGTCGGCCG AGTACAAACG CCATTGCTTG GGCTAGTGGT GCGCCGTGAT AAAGAAATTG CTAATTTTCA GTCTAAGCCT TTTTATGAAG TACTGGCACA TTTGGCAACG GACAAGCAAG AAACCTTCAG CGCCAAGTGG CAACCGAGTG AAGCTTGTCA GCCTTATATG GATGAAGAAG GACGAGTGTT AGCGAGAGGG TTAGCGCAAA ATGTGGTGAG TCGCATCAGC GATAAACCCG CCTTAGTCAC TCAATTAGTG GCTAAGGATA AGAAACAGCA TCCGCCTTTA CCTTACAGTT TATCCGCGTT GCAGATTGAT GCGGCCAAAC GGTTTGGTAT GAGTGCTAAG GATGTGCTCG ATACCTGCCA AAGTTTGTAT GAACGTCATA AACTCATTAC TTACCCACGC TCCGACAGTC GTTATTTACC CGTTGAGCAA CATAATCTTG CGCCTTCGGT ACTTAAGGCG ATAAGTGACG GTGCTGCTGA GTTATTGCAA GGTGCTGATG CACCCGATCC CCGTCTTAAA TCTAAAGCAT GGGATGATAA AAAAGTGGAC GCCCACCACG CAATCGTCCC CACAGAGAAG ACGGCTAACT TATCTAGCTT GAGTCAGCGT GAGAGGCAGT TATATCTTCA TATTGCCCGC CAGTACTTAG CCCAGTTTTA TCCGGCTTAT TGTTACTGTG AAACCACAGT GCAAGTGACG ATTGAAGGTG GCTTATTTAA TACCAAGGCG CGTCAGGATA AATCCCTCGG CTGGAAGCAA CTCTTTGCCC GCCAAGAGCC AAATGGCAGT AAGGCGAGTG GCAACAAGTC GACGGAAGAA AGCATGGGTA AGGACGATGA GGAGAATGAC GAGTTTATCG GCCAATTACC GCCTTTGAAA TTGGGGCAAG CTTTGCATTG TACTCGAGGC GAATTGCTTG AAAAAAATAC TCAGCCACCA AAGGCCTTTA CCGATGCGAC CTTACTCAGT GCGATGACGG GCATTAGTCG TTATGTCACT GACCCTGAGA TCCGTAAAAT TCTTAAAGAA ACCGATGGAT TAGGTACTGA GGCCACCCGT GCAGGTATTA TCGAATTGCT ATTCAAACGC GGTTTTTTAC AACGCTTAGG TAAATCCATT GTCTCGACAG ACGTGGGGAA AGGATTGATT AACAGTTTGC CTTTGAGCGC CACTACGCCG GATATGACAG CACTTTGGGA AGCGAGCTTG AACGGCATTT GTCATAAAGA AACCTCCTAT CAAGGATTTA TGCAGCCATT GCTAGGCACC TTATCCACAC TTATCCAACA CGCTGGAGCT CAGTTGCCAA CGGCGCTTAA TGGATTAAAA GGGCAAGGTT ATCGTAAAAC GGCAAGTCAT AAATCCGGTT ATCGTAAGTC GTATTCTAAA AAATCAAGTT CAGCGAAAGG CATAGGTACA ACAAAAAACG ATGTTTCCAA CAAATATGGT TCCAAAAATA CTAGTTCTAA AAGTTCGGTA ACTCGATCAA CCAGTCGTTC AGCTTCTAAT AGCCGTAAAT CTACAGCAGC AGTGTAA
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Protein sequence | MILYIAEKPS LGRAIADVLP KPHKKGDGFI EAANGDCVSW CVGHLLEQAE PDAYNPEFKA WKFEHLPIVP DKWQLTPKAA TRSQLTVLKR LVKQASMLVN AGDPDREGQL LVDEVIAYLG VTGDKLHQTQ RLLISDLNPQ AVKRALTQLR SNREFIPLST SALARSRADW LYGMNMTRAY TIQGKKVGYQ GVLSVGRVQT PLLGLVVRRD KEIANFQSKP FYEVLAHLAT DKQETFSAKW QPSEACQPYM DEEGRVLARG LAQNVVSRIS DKPALVTQLV AKDKKQHPPL PYSLSALQID AAKRFGMSAK DVLDTCQSLY ERHKLITYPR SDSRYLPVEQ HNLAPSVLKA ISDGAAELLQ GADAPDPRLK SKAWDDKKVD AHHAIVPTEK TANLSSLSQR ERQLYLHIAR QYLAQFYPAY CYCETTVQVT IEGGLFNTKA RQDKSLGWKQ LFARQEPNGS KASGNKSTEE SMGKDDEEND EFIGQLPPLK LGQALHCTRG ELLEKNTQPP KAFTDATLLS AMTGISRYVT DPEIRKILKE TDGLGTEATR AGIIELLFKR GFLQRLGKSI VSTDVGKGLI NSLPLSATTP DMTALWEASL NGICHKETSY QGFMQPLLGT LSTLIQHAGA QLPTALNGLK GQGYRKTASH KSGYRKSYSK KSSSAKGIGT TKNDVSNKYG SKNTSSKSSV TRSTSRSASN SRKSTAAV
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