Gene Sputcn32_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2435 
Symbol 
ID5078569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2819934 
End bp2822060 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content47% 
IMG OID640499603 
ProductDNA topoisomerase III 
Protein accessionYP_001183955 
Protein GI146293531 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.874224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTCT ATATCGCAGA AAAACCTAGC CTAGGGCGGG CCATTGCCGA TGTATTGCCT 
AAACCCCATA AAAAAGGCGA TGGATTTATC GAAGCCGCTA ATGGCGATTG CGTGTCTTGG
TGTGTCGGTC ACTTGCTCGA ACAAGCAGAA CCTGATGCCT ATAATCCTGA ATTTAAAGCA
TGGAAATTTG AGCACTTACC GATAGTGCCA GACAAGTGGC AACTGACACC TAAGGCAGCA
ACCCGCAGTC AACTCACTGT GCTTAAACGA TTAGTTAAAC AAGCGAGTAT GCTGGTTAAT
GCGGGCGATC CCGACCGTGA AGGGCAGTTA CTCGTGGATG AAGTGATTGC CTATCTTGGT
GTGACGGGGG ACAAGCTACA TCAAACCCAG CGTTTACTGA TCAGTGACTT AAACCCACAA
GCTGTAAAAC GGGCTCTAAC GCAGCTACGC AGTAATCGCG AATTTATCCC ATTATCTACC
TCTGCTTTAG CCCGTAGCCG TGCCGATTGG CTCTATGGTA TGAATATGAC GCGTGCGTAC
ACCATCCAAG GTAAAAAGGT CGGTTATCAA GGCGTGTTAT CCGTCGGCCG AGTACAAACG
CCATTGCTTG GGCTAGTGGT GCGCCGTGAT AAAGAAATTG CTAATTTTCA GTCTAAGCCT
TTTTATGAAG TACTGGCACA TTTGGCAACG GACAAGCAAG AAACCTTCAG CGCCAAGTGG
CAACCGAGTG AAGCTTGTCA GCCTTATATG GATGAAGAAG GACGAGTGTT AGCGAGAGGG
TTAGCGCAAA ATGTGGTGAG TCGCATCAGC GATAAACCCG CCTTAGTCAC TCAATTAGTG
GCTAAGGATA AGAAACAGCA TCCGCCTTTA CCTTACAGTT TATCCGCGTT GCAGATTGAT
GCGGCCAAAC GGTTTGGTAT GAGTGCTAAG GATGTGCTCG ATACCTGCCA AAGTTTGTAT
GAACGTCATA AACTCATTAC TTACCCACGC TCCGACAGTC GTTATTTACC CGTTGAGCAA
CATAATCTTG CGCCTTCGGT ACTTAAGGCG ATAAGTGACG GTGCTGCTGA GTTATTGCAA
GGTGCTGATG CACCCGATCC CCGTCTTAAA TCTAAAGCAT GGGATGATAA AAAAGTGGAC
GCCCACCACG CAATCGTCCC CACAGAGAAG ACGGCTAACT TATCTAGCTT GAGTCAGCGT
GAGAGGCAGT TATATCTTCA TATTGCCCGC CAGTACTTAG CCCAGTTTTA TCCGGCTTAT
TGTTACTGTG AAACCACAGT GCAAGTGACG ATTGAAGGTG GCTTATTTAA TACCAAGGCG
CGTCAGGATA AATCCCTCGG CTGGAAGCAA CTCTTTGCCC GCCAAGAGCC AAATGGCAGT
AAGGCGAGTG GCAACAAGTC GACGGAAGAA AGCATGGGTA AGGACGATGA GGAGAATGAC
GAGTTTATCG GCCAATTACC GCCTTTGAAA TTGGGGCAAG CTTTGCATTG TACTCGAGGC
GAATTGCTTG AAAAAAATAC TCAGCCACCA AAGGCCTTTA CCGATGCGAC CTTACTCAGT
GCGATGACGG GCATTAGTCG TTATGTCACT GACCCTGAGA TCCGTAAAAT TCTTAAAGAA
ACCGATGGAT TAGGTACTGA GGCCACCCGT GCAGGTATTA TCGAATTGCT ATTCAAACGC
GGTTTTTTAC AACGCTTAGG TAAATCCATT GTCTCGACAG ACGTGGGGAA AGGATTGATT
AACAGTTTGC CTTTGAGCGC CACTACGCCG GATATGACAG CACTTTGGGA AGCGAGCTTG
AACGGCATTT GTCATAAAGA AACCTCCTAT CAAGGATTTA TGCAGCCATT GCTAGGCACC
TTATCCACAC TTATCCAACA CGCTGGAGCT CAGTTGCCAA CGGCGCTTAA TGGATTAAAA
GGGCAAGGTT ATCGTAAAAC GGCAAGTCAT AAATCCGGTT ATCGTAAGTC GTATTCTAAA
AAATCAAGTT CAGCGAAAGG CATAGGTACA ACAAAAAACG ATGTTTCCAA CAAATATGGT
TCCAAAAATA CTAGTTCTAA AAGTTCGGTA ACTCGATCAA CCAGTCGTTC AGCTTCTAAT
AGCCGTAAAT CTACAGCAGC AGTGTAA
 
Protein sequence
MILYIAEKPS LGRAIADVLP KPHKKGDGFI EAANGDCVSW CVGHLLEQAE PDAYNPEFKA 
WKFEHLPIVP DKWQLTPKAA TRSQLTVLKR LVKQASMLVN AGDPDREGQL LVDEVIAYLG
VTGDKLHQTQ RLLISDLNPQ AVKRALTQLR SNREFIPLST SALARSRADW LYGMNMTRAY
TIQGKKVGYQ GVLSVGRVQT PLLGLVVRRD KEIANFQSKP FYEVLAHLAT DKQETFSAKW
QPSEACQPYM DEEGRVLARG LAQNVVSRIS DKPALVTQLV AKDKKQHPPL PYSLSALQID
AAKRFGMSAK DVLDTCQSLY ERHKLITYPR SDSRYLPVEQ HNLAPSVLKA ISDGAAELLQ
GADAPDPRLK SKAWDDKKVD AHHAIVPTEK TANLSSLSQR ERQLYLHIAR QYLAQFYPAY
CYCETTVQVT IEGGLFNTKA RQDKSLGWKQ LFARQEPNGS KASGNKSTEE SMGKDDEEND
EFIGQLPPLK LGQALHCTRG ELLEKNTQPP KAFTDATLLS AMTGISRYVT DPEIRKILKE
TDGLGTEATR AGIIELLFKR GFLQRLGKSI VSTDVGKGLI NSLPLSATTP DMTALWEASL
NGICHKETSY QGFMQPLLGT LSTLIQHAGA QLPTALNGLK GQGYRKTASH KSGYRKSYSK
KSSSAKGIGT TKNDVSNKYG SKNTSSKSSV TRSTSRSASN SRKSTAAV