| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2433 |
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| Symbol | |
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| ID | 5078567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2816860 |
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| End bp | 2818386 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499601 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001183953 |
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| Protein GI | 146293529 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0437248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC ACTTTTATCA CGAATCGACA CTGAGATTAT GCAGTAGCCT ACAACTCGAA
AAGTCCCTGC AAAGTTACTT CGAGTTTATT CGGGATGAAC TGCCTATTGA TGGGCTATTT
ATTAATATTT TTCGCAAACA ATTTAATGAC ATACAATTTA TTGCTCATGT CAATGCTAAC
CAATCATGCA CCTTAGATAA GCAAATATCT ATCCCTGAAG AACTGGCTAG GAGCTTAGAT
GATCCTCAAC GCCCGCGCGT GAGAATTGTT AATGATATTG AGCACGACCC AATCACAGCT
TTAGTTGCAC CTAAGGTGAT CAACGGTATT CGTTCGCTGA TCATTTTGAG AATGTCTATC
GAAAATACCC ACCTTGGGAT AGTCGGATTT TATGCCAAAA CGACAGGCGT TTTTCGCCCT
CGTCATGCCG ATTTAATTGC TCCGCATATG CATGCATTAG CCTTAATCAC TGCACTCAAT
TTACGCGGAC GTAACTTACT TAAAGAAAAT GAAGCACTCT CAAAACAGAA TGTGAGCCTT
CGCAGAACAT TAGACGTGCA AAATGGCGTA GTGGGGGCCA ATTCAGGCTT GAAACACGTC
ATGCAGCAAG TGCAATCCAT TGCCAAGATT AATACAACAG TGCTAATGCT CGGTGAAACG
GGATGTGGTA AAGAAGTGAT AGCCAATGCG ATTCACGAAC TTTCTGAACG TTCAGATAAG
CCCTTTATCA AGGTCAACTG CGGCGCTATT CCAGATACTT TGATTGACTC CGAACTCTTT
GGTTATGAAA AAGGAGCATT TACTGGGGCT GAGTCCCGTA AAATTGGCTA CTTCGAACAA
GCCAATGGCG GCACTATCTT TCTCGATGAA ATAGGTGAAC TACCATTATC CGCACAGGTT
AGATTACTCC GTGTACTTCA AAATAGTTGT ATTACCCGAG TAGGTGGACA CGATGCGGTA
CAACTTGATA TTCGGATAGT GGCTGCCACC CATAGAAATT TACAAGCTAT GATACACAGA
GAAGTGTTTC GGGAAGATCT TTGGTATCGC TTAGCCATTT TTCCTATTGA AATTCCTTCA
TTAAGACAAA GACGTACAGA CATTCCTTTA CTCGTACAGC ATTTTATCGA GCAACTGAGT
TCAAAGTTCA ACCTGCCTCA ATTACCAAGA GTTGCACCGG AACAATTAAA TATTCTGAAC
CAATACGCTT GGCCAGGAAA TGTCAGAGAA CTCATTAACG TACTCGAACG GGCGATAATA
CAGCAGCCTT CAGGACCATT AGATTTTAGC TTCCTTGCGC CACATCAGGA TAAGGAAATT
ACGACCCAAG CAAATCAAAC CGTTATCATA GATCCAAACT ATGCGAGCGA TAAACTTGTG
CCCCTTGATG TTATGACCAG AAAATACATT AGTCATGCAC TGCGAATTAC AGGTGGAAAA
CTCTATGGCC CAGGAGGTGC GGCTGAGTTA TTGGACATCA ATGCCAATAC CCTGCGCAGC
AAGATGAAGA AACTGGGGAT TGTTTAG
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| Protein sequence | MEKHFYHEST LRLCSSLQLE KSLQSYFEFI RDELPIDGLF INIFRKQFND IQFIAHVNAN
QSCTLDKQIS IPEELARSLD DPQRPRVRIV NDIEHDPITA LVAPKVINGI RSLIILRMSI
ENTHLGIVGF YAKTTGVFRP RHADLIAPHM HALALITALN LRGRNLLKEN EALSKQNVSL
RRTLDVQNGV VGANSGLKHV MQQVQSIAKI NTTVLMLGET GCGKEVIANA IHELSERSDK
PFIKVNCGAI PDTLIDSELF GYEKGAFTGA ESRKIGYFEQ ANGGTIFLDE IGELPLSAQV
RLLRVLQNSC ITRVGGHDAV QLDIRIVAAT HRNLQAMIHR EVFREDLWYR LAIFPIEIPS
LRQRRTDIPL LVQHFIEQLS SKFNLPQLPR VAPEQLNILN QYAWPGNVRE LINVLERAII
QQPSGPLDFS FLAPHQDKEI TTQANQTVII DPNYASDKLV PLDVMTRKYI SHALRITGGK
LYGPGGAAEL LDINANTLRS KMKKLGIV
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