Gene Sputcn32_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2427 
Symbol 
ID5078561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2809442 
End bp2810458 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID640499595 
Producthypothetical protein 
Protein accessionYP_001183947 
Protein GI146293523 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACC AAATCGAAGA TTTACTTGAA CATTGGTTAC CACTTGCGGA TGACGCTTGG 
GTGCTTGCTG TTATCACTCA TGTTCAAGGT TCCGCTTACC GTAAACCTGG CGCCATGATG
CTGTTCCATG AGTTTGGCCA AGGGGCGGGC ATTTTAAGTG GTGGATGTTT AGAAGCGGAT
TTGCGCCGAT ATGCTCAAAA TGCGATGCAG ACGAAGCAAG TGATGTGTGT CACCTATGAT
GCGAGTGATG AGTCTGATGC CAGTTATCGA CTAGGCTGTG GCGGCATAGT CGATATCATG
TTGATCCCGC TTTTAAAAGA AAATCATGAT CTAGGTTTGA TTGACCTTGT TCATGCATTT
CGTCATGGGC AATCGGGATA TTATCAATTG CCTTTAGTCG CATCTGGAAC TGATGCGCGG
CAGTATCAAG CACGTTTCTA TTCCGCAGAT GCTGCGCCAT TTCCGATAAG CGATTTTGCT
AAATCAAAGA TTGTGAAACA AGAGTCAAAT GACACCCTAG TTATTCCCCT GAGGCCCCGA
TTCCATATTG GGATTTTTGG TGGCGGTATT GATGCTAAAC CTATCGCTGC GATTGCCCAT
TCATTAGGCT GGCAAGTTAC CGTTATCGAT GGCCGTACTG CTTACGCTAG AGCGGCAGAT
TTTCCCCATG CTCATATCAT CAAACAAGCC GTGGGTGAAC TTGCTGCCAA TGTTATCGCT
CAACTAGACT GCGCTGTGGT GATAAACCAT AACCTGGGCT TAGATGCTGC AGTATTAAAG
GCTATTCAAC CTTATTCACT GGATTATGTG GCATTGCTTG GGCCTGCCCA CCGGCGGGAT
AAAGTACTGG CGATGGCAGG TTTATCTGCA CAATCGTTTT CTGGGGTGTT TTCGGCCCCC
GCGGGTCTGG CGCTTGGCGG TGAGTTACCG AGCGCCATTG CTTTAAGTAT TTTAGCTCAA
TGTCACGGTG TGCTACATGG AGCAACACTG AAACAACTTG ATGAGATTAT GGGTTAA
 
Protein sequence
MDHQIEDLLE HWLPLADDAW VLAVITHVQG SAYRKPGAMM LFHEFGQGAG ILSGGCLEAD 
LRRYAQNAMQ TKQVMCVTYD ASDESDASYR LGCGGIVDIM LIPLLKENHD LGLIDLVHAF
RHGQSGYYQL PLVASGTDAR QYQARFYSAD AAPFPISDFA KSKIVKQESN DTLVIPLRPR
FHIGIFGGGI DAKPIAAIAH SLGWQVTVID GRTAYARAAD FPHAHIIKQA VGELAANVIA
QLDCAVVINH NLGLDAAVLK AIQPYSLDYV ALLGPAHRRD KVLAMAGLSA QSFSGVFSAP
AGLALGGELP SAIALSILAQ CHGVLHGATL KQLDEIMG