Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2412 |
Symbol | |
ID | 5080490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2793504 |
End bp | 2794193 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640499580 |
Product | siderophore biosynthesis protein, putative |
Protein accession | YP_001183932 |
Protein GI | 146293508 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAGTC AATTTAGTGA CCATTGTTTA ACGCGGCTAT GTTTAACACA GCTATCGGCT ATTACAAGCA TCAATGGTTT CCAGTTCAGA GCGTTAGATC TTACACAAGA CATTCCAACA CTACAGTCTT GGCTTAACCA AGATTACGCC AAGTTTTGGG GTATGCAGGG CTTGAACCTT GATGCCATAA AAAATCTGTT AGCAACTACA GAGCACAAGT TTGCCTTGAT AGGTGAATGG CAGGCCAAAG CGCTATTTAT GGTGGAACTT TACGATCCCG CCCACGATGA AGTCGGCCAG CACTATCGTG CTGCGCCGGG TGATTGTGGT ATGCATTTGA TTATCGCGCC GCCCGATGGC AAACCCGTCA GCGGCTTATC CTTCAAAGTG ATGGATGCGA TAGCTAAGCT CGTGCTTGAA AAACTGGCCT TTACTCGCCT CGTAGTTGAA CCCGATCAAC TCAATATGAA AATTCATCAC TTAAATAGCC GAGTAGGTAT TCGCTATGAA AAGGCAATTA AATTAAGCAC TAAAGCGGCT TTCCTCGGAT TTTGCACTGC GGCTGATCGT CTGCTCGCAT CAAGCTCGGC TTCTTCGACG CGCTTAGCCC AAACAACCTC AGCGCTGCCA AGCACGCTCG CGGCGCCCGT AATCTCTCCC ATAACATTAT CGACTCTTCA GGTGAATTAG
|
Protein sequence | MASQFSDHCL TRLCLTQLSA ITSINGFQFR ALDLTQDIPT LQSWLNQDYA KFWGMQGLNL DAIKNLLATT EHKFALIGEW QAKALFMVEL YDPAHDEVGQ HYRAAPGDCG MHLIIAPPDG KPVSGLSFKV MDAIAKLVLE KLAFTRLVVE PDQLNMKIHH LNSRVGIRYE KAIKLSTKAA FLGFCTAADR LLASSSASST RLAQTTSALP STLAAPVISP ITLSTLQVN
|
| |