| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2398 |
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| Symbol | |
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| ID | 5080476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2779224 |
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| End bp | 2780099 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640499566 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001183918 |
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| Protein GI | 146293494 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0731299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AATTGCAGAA AGTCTTGGCC CGTGCAGGCC ATGGCTCCCG TCGTGAGATG
GAGGCATGGA TTGCTGCAGG CCGAGTTAGT ATTGATGGTG AAATTGCTAG CCTTGGGGAT
CGTATTGAAG CTGATGCTAA AGTGCGTATC GATGGCAGAG CCATTTCATT AAAGTCTGCC
GAAGACGTGA TTTGCCGTGT GCTGGCATAT CATAAACCCG AAGGCGAAAT TTGTAGTCGT
AAAGATCCTG AAGGCCGTCC AACGGTATTC GATCGCTTAC CTAAAGTGCG TGATTCTCGC
TGGGTAGCGG TAGGTCGTTT AGACATTAAC ACCTCAGGTT TATTGTTGTT TACCTCAGAT
GGTGAGTTAG CAAACCGTTT AATGCACCCA TCGAACGAAG TGGACCGTGA ATACGCGGTG
CGTACCTTTG GTGAAATTCC AGAGGCGACA GTGCAACGTT TGCGTACAGG TGTGATGTTA
GAAGACGGCC CAGCGCAGTT TGATAGCATC AAGCCAGCGG GCGGCGAAGG CATGAACCAG
TGGTGGCATG TGTGTTTACG CGAAGGTCGT AACCGTGAAG TACGCCGTTT GTGGGAATCC
CAAGAAGTGC AGGTGAGCCG TTTGATCCGT ATCCGTTATG GTATGGTCGA ATTGCCAAAA
TCACTGCCCC GCGGTGGTTG GGTTGAATTG CCCGTTGAAC AAGTTAATTA TTTGCGTCAA
TTAGCGGGTC TTGAGCCTGA AACGCGCACT ATGCTTGCTG CTGATAAACA CAGTGTGGCC
CGTGCTCAGG TTAAAAGTGC CAAAATTCGC CGCGCGGTGC GTAAGCATAA AGTCACCGGG
GCTGGAAAAG CTAAACCAAC GCGCCAGCGC AGTTAA
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| Protein sequence | MSEKLQKVLA RAGHGSRREM EAWIAAGRVS IDGEIASLGD RIEADAKVRI DGRAISLKSA
EDVICRVLAY HKPEGEICSR KDPEGRPTVF DRLPKVRDSR WVAVGRLDIN TSGLLLFTSD
GELANRLMHP SNEVDREYAV RTFGEIPEAT VQRLRTGVML EDGPAQFDSI KPAGGEGMNQ
WWHVCLREGR NREVRRLWES QEVQVSRLIR IRYGMVELPK SLPRGGWVEL PVEQVNYLRQ
LAGLEPETRT MLAADKHSVA RAQVKSAKIR RAVRKHKVTG AGKAKPTRQR S
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