| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2378 |
|---|
| Symbol | |
|---|
| ID | 5080456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2754460 |
|---|
| End bp | 2756742 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640499546 |
|---|
| Product | formate acetyltransferase |
|---|
| Protein accession | YP_001183898 |
|---|
| Protein GI | 146293474 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1882] Pyruvate-formate lyase |
|---|
| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.499739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA AAACTGAACT GTTTGCCAGC GCATGGGAAG GTTTCACTCC TGGCGATTGG
AAATCTGAAG TCAATGTACG TGACTTTATC CAACAAAACT ATACTCCCTA TGAAGGCGAC
GAATCATTCC TAGCCGGTGC CACCGAAGCA ACCACAACAC TGTGGGATAA AGTGATGGAA
GGCATTAAAC AGGAAAACCG TACCCACGCG CCTGTTGATT TCGATACTAA GATGGTGTCA
ACCATCACCT CCCATGATGC GGGTTATATC AACAAAGATT TAGAAACTAT CGTTGGCTTG
CAAACAGATG CACCATTAAA ACGTGCAATG TTACCTAACG GTGGTATTCG TATGGTGGAA
AGCTCATGCG CCGCCTACGG TCGTGAACTA GATGAAGATG TTAAATACGT CTATTCAGAA
CTGCGTAAAA CCCATAACCA AGGCGTGTTT GATGTTTACA CACCAGAAAT TATGGCTTGC
CGTAAATCAG GTGTATTAAC CGGTTTACCC GATGCCTATG GCCGTGGCCG TATTATCGGT
GACTATCGCC GAGTCGCACT TTACGGTATC GATTACTTGA TGAAAGATAA GTTTGCCCAA
TTTAGCTCAC TGCAAGCGCA GTTTGAAGCG GGTGAAGATT TATCAAATGT TATTCAACTA
CGCGAAGAAA TTGCCGAACA ACACCGTGCA CTAGGCCAAA TGAAGAAAAT GGCTGCTAAG
TATGGTTTTG ATATTTCAGG CCCAGCTAAA AATGCTCGCG AAGCGATTCA ATGGACTTAC
TTTGGCTACT TAGCCGCAGT GAAGAGCCAA AATGGCGCGG CGATGTCATT AGGACGTACT
TCATCATTCC TTGATGTCTA TATCGAACGC GATCTGAAAA ATGGCACCTT AACTGAGCTA
CAAGCTCAGG AAATGATTGA CCATTTCGTG ATGAAACTGC GTATGGTGCG TTTCCTACGT
ACTCCTGAAT ACGATGAGTT ATTCTCCGGC GACCCGATTT GGGCAACTGA ATCTATTGGT
GGTATGGGCT TAGATGGCCG TACTTTAGTG ACCAAATCAA GCTTCCGTTT CTTGAATACC
CTTTACACTA TGGGTCCAAG TCCTGAGCCT AATATCACCG TGCTATGGTC AGATAAACTG
CCGATCGGTT TCAAAAAATA TTGCGCTAAA GTGTCTATCG ATACTAGCTC AATCCAATAC
GAAAACGATG ACTTAATGCG TCCTGATTTC CAATCTGACG ATTATGCTAT CGCCTGTTGC
GTAAGCCCAA TGGTTGTGGG TAAACACATG CAGTTCTTCG GTGCTCGTGC AAACCTCGCA
AAAACCATGT TATATGCGAT CAACGGCGGT ATTGATGAAA AACTGAAAAT CCAAATCGCC
CCTAAAGCAG ACATGATCAC TGACGAAGTG CTCAACTTTG ATGATGTAAT GAATCGTCTT
GACGGCTTAA TGGATTGGTT AGCAACCCAA TATGTTGCGT CATTGAATGC TATCCATTTT
ATGCACGACA AGTACTCTTA CGAAGCTGCC CTCATGGCAC TGCATGACAG AGATGTACGC
CGTACTATGG CTTGTGGTAT TGCCGGTCTA TCTATCGCTG CCGACTCACT GTCTGCGATT
AAATACGCTA CCGTAAAACC TGTTCGTGAT GAAAACGGCA TTGCTGTTGA TTTCGACATC
AGTGGCGACT ATCCAAAATT TGGTAACAAC GACCCACGTG TTGACGATAT CGCCTGTGAC
TTAGTTGAAC GTTTTATGGC CAAAATTCGT GACCGTAAAA TGTATCGCAA TGCAGTACCA
ACTCAGTCAA TTCTGACCAT CACCTCAAAC GTGGTTTATG GTAAGAAAAC AGGTAACACA
CCCGATGGTC GTCGCTCAGG TGCGCCATTT GCACCGGGTG CAAACCCAAT GCATGGCCGT
GACGAAAAAG GTGCAATCGC TTCTTTAACT TCTGTGGCTA AACTGCCTTT CGCCCACGCC
CAAGACGGTA TTTCTTATAC CTTCTCAATC GTGCCAAATG CCTTAGGTAA AGATGATGAT
GCACGCCGCG CCAACTTAGC AGCATTGATG GATGGCTATT TCGACCACAA TGACAAAAAA
GAAGGTGGCC AGCACTTAAA CGTCAACGTG ATGAATCGTG AAATGCTCGA AGACGCTGTT
AAGCATCCAG ACAAGTATCC ACAACTGACC ATCCGTGTTT CTGGTTATGC AGTGCGCTTT
AATTCACTGA CGCCAGAGCA ACAACAAGAT GTGATCACAC GTACTTTTAC TAAAGGTCTG
TAA
|
|---|
| Protein sequence | MTDKTELFAS AWEGFTPGDW KSEVNVRDFI QQNYTPYEGD ESFLAGATEA TTTLWDKVME
GIKQENRTHA PVDFDTKMVS TITSHDAGYI NKDLETIVGL QTDAPLKRAM LPNGGIRMVE
SSCAAYGREL DEDVKYVYSE LRKTHNQGVF DVYTPEIMAC RKSGVLTGLP DAYGRGRIIG
DYRRVALYGI DYLMKDKFAQ FSSLQAQFEA GEDLSNVIQL REEIAEQHRA LGQMKKMAAK
YGFDISGPAK NAREAIQWTY FGYLAAVKSQ NGAAMSLGRT SSFLDVYIER DLKNGTLTEL
QAQEMIDHFV MKLRMVRFLR TPEYDELFSG DPIWATESIG GMGLDGRTLV TKSSFRFLNT
LYTMGPSPEP NITVLWSDKL PIGFKKYCAK VSIDTSSIQY ENDDLMRPDF QSDDYAIACC
VSPMVVGKHM QFFGARANLA KTMLYAINGG IDEKLKIQIA PKADMITDEV LNFDDVMNRL
DGLMDWLATQ YVASLNAIHF MHDKYSYEAA LMALHDRDVR RTMACGIAGL SIAADSLSAI
KYATVKPVRD ENGIAVDFDI SGDYPKFGNN DPRVDDIACD LVERFMAKIR DRKMYRNAVP
TQSILTITSN VVYGKKTGNT PDGRRSGAPF APGANPMHGR DEKGAIASLT SVAKLPFAHA
QDGISYTFSI VPNALGKDDD ARRANLAALM DGYFDHNDKK EGGQHLNVNV MNREMLEDAV
KHPDKYPQLT IRVSGYAVRF NSLTPEQQQD VITRTFTKGL
|
|---|
| |