| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2376 |
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| Symbol | |
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| ID | 5080454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2749753 |
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| End bp | 2751366 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499544 |
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| Product | formate/nitrite transporter |
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| Protein accession | YP_001183896 |
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| Protein GI | 146293472 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAT CACATTATGA TGCTCATATG AGGGCGCAAC CTCATCTCAG CTCGCCAACA
CCATTCAATC CACATCATAA CGGAAAGACT GAGCCTGATA AGCGAAGTCT TTATCAACAT
GCTGAACACT ATGGGCAAAG TAAGGTAGCT AAATCTGCTT GGCAATCATT TGGTTTGGCA
GCATTTGCAG GCGGTTTTAT TGCCTTAGCT TTTGTATTTT ATATCACAGT AACAACGGGG
GCGTCTGGGA GTGCTTGGGG GCTTGTACGC TTAGCGGGAG GGTTAGCTTT TAGTTTGGGA
CTGATGTTGG TGGTGATTTG TGGCGGCGAG CTGTTCACGA GTACCGTGTT GAGTTCTGTT
GCTTGGGCAC AAAAGAAAGT CACTACTAAA CAACTTGTTA TGTGCTGGAC GCGGGTCTAC
CTGGGTAATC TACTCGGTGC AATGGTGATG TTGCTACTGA TTATGTCTGC CCGTATGTAT
CTGCTCGACG GGGGACGCTG GGGGATAAAT GCCCTAACGA TCGCTCAGCA TAAATTACAT
CACGGCTGGT TTCAGGCATT TAGTTTAGGG ATCCTTTGTA ACATGTTGGT TTGTTTAGGG
GTATGGATGA CCTTTGCGAG CCGTGATGCG TTAACCAAAG CGATATTACT GATGTTGCCA
GTCGCCATGT TTGTGAGCAG TGGTTTTGAG CACAGCATAG CTAATCTGTT TATGGTGCCC
CTAGGAATTG CCATTCATCT TTTTGCTGAT CAGACATTTT TTACCTCAGC AGCTATTGAT
GCCGCGCAAT TCAGTGATTT AACCCTCAGC CACTTTGTCA TCAAGAATCT TATTCCGGTG
ACACTGGGCA ATATTGTTGG TGGTGGCATT TTTGTGGGAC TCGGTTATTG GTGGATTGAG
CAAGCCAAAC CTCAACACCC ATCAAACATT GAGCGCCACA CCCCAACATT AACCTTAGTC
AATGCATTGA CTGCGACTTC TTCTTACTTA AACAACGATA TGCCAACGGA TACCGCGCTT
GCTAATGAGC CTGCGTTATC AATAAGTCCT GATGCTCATA TTTATTCTAT TTCTGCCGGA
GATCAACCTA CTATGTTAAA TGCCAAAGCG GTTTCAAAAC CTATTCCTAA AATGTGTGTG
AGTGATGTGA TGGACAGACA TCCCATCACG CTAAGTGCCG ATCAATCTGT CTATGCAGGT
TTAAAATTAT TAAGTGATGC AAATGTCCGC TCTGCGCCTG TGGTCGATGA TAAACAAGCA
TTAGTGGGGT TTATTTCACA ACAAGATCTA TTACGAAGTC TTTGGGCACA GGAGTTTACC
CGAGGTGTAC CTGATAAAGT GGCTGACTTA ATGCAAACCG AGGTGTTAAC TGTCTCTCCT
AAGGATCCAC TGGATGCATT AATTGAGTTA ATGGTTGTTG ATCGTCAAAA GTTGTTTCCT
GTAACGGATA GCGGACTGAT GATTGCGAGT ACTTATCAAA GTTATGAAGA ACGGTTGCGC
CATGCCTATG CCACTAAGCC AAGTGCTTTT CCGGTGATAG AGCAGGGTAA GTTGTGTGGG
ATGGTGACTC GAGAAGAGAT TGCCAAAGCG GTTTGTGGTG CTTTTTACGA TTAA
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| Protein sequence | MKASHYDAHM RAQPHLSSPT PFNPHHNGKT EPDKRSLYQH AEHYGQSKVA KSAWQSFGLA
AFAGGFIALA FVFYITVTTG ASGSAWGLVR LAGGLAFSLG LMLVVICGGE LFTSTVLSSV
AWAQKKVTTK QLVMCWTRVY LGNLLGAMVM LLLIMSARMY LLDGGRWGIN ALTIAQHKLH
HGWFQAFSLG ILCNMLVCLG VWMTFASRDA LTKAILLMLP VAMFVSSGFE HSIANLFMVP
LGIAIHLFAD QTFFTSAAID AAQFSDLTLS HFVIKNLIPV TLGNIVGGGI FVGLGYWWIE
QAKPQHPSNI ERHTPTLTLV NALTATSSYL NNDMPTDTAL ANEPALSISP DAHIYSISAG
DQPTMLNAKA VSKPIPKMCV SDVMDRHPIT LSADQSVYAG LKLLSDANVR SAPVVDDKQA
LVGFISQQDL LRSLWAQEFT RGVPDKVADL MQTEVLTVSP KDPLDALIEL MVVDRQKLFP
VTDSGLMIAS TYQSYEERLR HAYATKPSAF PVIEQGKLCG MVTREEIAKA VCGAFYD
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