Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2369 |
Symbol | |
ID | 5080397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2738300 |
End bp | 2739496 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499537 |
Product | RDD domain-containing protein |
Protein accession | YP_001183889 |
Protein GI | 146293465 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAC AGCAAATGGA TTTGGGTGAA GACCCAAAAA CAATGGTAAC ACCAAGGGCA TTTACCATTG CACAAACCGT GCTATATACC CCATTGGCAA CGCCGCTAAA GCGGGCATTA GCCATCATGA TTGATGGTTT GTTAATCACA GTGTTAGCCG AACAGATGGA TTGGATGTTT ATCTTGCTGG TGATCGGCAT TATCTGGATT GAAAAGCGCA GTCGTAAGTT TGGTCGTCTA CTCAAATGGG GACTTTATGC TGCGCTGTTA GCTTTTATGC TGCTTACCGC AGTGGGTAAT CTGTTTAATC TAAATACCTC AGTCGGTAAA CATGATGAGC AAACCGAGTC GCAGTTGGCC GTAGGAGAAC AAGTGATTAG ATCGCTACCC GCATTGATTT CGTTAAACCT GTGTACCAGT TACGATTGCG GTAAGACCCA AATTCAAGCT TTACGGACAA CGACAGAGCG TGTTGCGAGA TCAAATGGAA TGAAGGACAT AGAGTTACGG GAAATGGTTT TACAAACCAT CGCTGACAGC AGTCTACCGA CAGAAGATCG CGCTAAATTG CGGGAGGGCG TCCTTAACGG CACTCTTTGG CCTGTTATAA CACTTCACAC TGATTTGGCT ACGACTGGCT CCCCACTCGA ACCTATATCA AATCAATCCC TATCTTCCGC TCAATCACCA CACCGTACGG CGGATATCGA ACTCGCCGCT TCTCAATCTT CTCGCACAAC AAGTAGTGAT GAGGATGAAG CTACTCGCCA TAGTATTATC GCTTGGATTA AGGGCTTTAT GAGTGATATG GGACTAGGCT TTGGTTGGGC CGCATTTTAC TTTACCGTTT TTACTGCGCG GTTCGATGGC CAAACCTTAG GTAAGAAAAT ACTGGGTATT CGGGTGATTC AACTTGATGG TGCCAATATC AGTTTATGGG CCGCGTTTGG CCGTTATGGG GGCTATGCCG CCGGTTTTAC CACAGGCTTA CTTGGCTTTA TGCAAATATT TTGGGATCCC AATCGGCAGG GGATCCAAGA TAAAATATCT TCAACAGTCG TGATAGACTT AGTGCAAATG CATAAAAAGC AACGATTAGA GCAGCAAGCA CAGCGTCAAG ATGTGATGCC TGTGCTGACG AATGATCCTT CTACGTCTGC TCACCTTACA ACAAGCACCC GTTCGGAGCA CCTATGA
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Protein sequence | MKQQQMDLGE DPKTMVTPRA FTIAQTVLYT PLATPLKRAL AIMIDGLLIT VLAEQMDWMF ILLVIGIIWI EKRSRKFGRL LKWGLYAALL AFMLLTAVGN LFNLNTSVGK HDEQTESQLA VGEQVIRSLP ALISLNLCTS YDCGKTQIQA LRTTTERVAR SNGMKDIELR EMVLQTIADS SLPTEDRAKL REGVLNGTLW PVITLHTDLA TTGSPLEPIS NQSLSSAQSP HRTADIELAA SQSSRTTSSD EDEATRHSII AWIKGFMSDM GLGFGWAAFY FTVFTARFDG QTLGKKILGI RVIQLDGANI SLWAAFGRYG GYAAGFTTGL LGFMQIFWDP NRQGIQDKIS STVVIDLVQM HKKQRLEQQA QRQDVMPVLT NDPSTSAHLT TSTRSEHL
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