| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2368 |
|---|
| Symbol | |
|---|
| ID | 5080396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2737182 |
|---|
| End bp | 2738303 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499536 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_001183888 |
|---|
| Protein GI | 146293464 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.343145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG TCGTTATTTC TGGGAGTGGC TTATTTACGC CGCCCTACAG TATTTCCAAT
GAAGCTTTGG TTGAAAGCTT CAATGCCTAT GTTGATATTT TCAATCTTGA AAATGCAGGC
TTAATTGAAC AAGGACATGT TGCGGCCTTA TCCTATTCAT CAAGTGAGTT TATTGAAAAA
GCATCTGGGA TTAAGCACAG ATATGTGATG GTGAAAGAGG GCATACTCGA TCCTGAAATT
ATGATGCCGC TCATTCCTGA ACGCAGTAGC GACGAGTTAT CAATGCAGGC TGAAATAGGG
GTTGAGGCGG CGCTGATGGC GCTAAACAAT GCCAATCTTA AGGCGGAGCA AATTGATCTT
GTGATTGTTG CCTGTGCTTA TACTCAGCGC GCTTATCCCG CGATGGCGAT TGAAATCCAG
CGTGCCTTAG GTACCCGTGG CTACGGTTAC GATATGCAGG TGGCTTGTTC ATCGGCGACT
TTTGCGATTG TTGCGGCTGC TAATGCGATT GCGACAGGTT CTGCCTCAAG AGTGCTAGTG
ATCAACCCCG AAATTTGCTC GGCGCAGGTG AATTATCGCG ACCGTGATAG CCATTTTATC
TTTGGCGATG TGGCGACGGC CCTTGTACTT GAAGAGCAGA GTTTAGTCGA GCCCAATAAA
GGCTTTACGA TTCTCTCAAG CCGTTGCTTC ACCGATTATT CGAATAATAT TCGCAGTAAT
TTTGGCTTTT TAAATCGCTG CGATCCAAGC TCGGCACATC AAGCCGACAA GTTATTCCAC
CAACAAGGGC GCAAAGTATT TAAAGAACTC TTGCCGATGA TTTATCAGCA TTTGGATGAA
CATCTGGCCG AGCAAGCATC AACGCCACAG TCCTTCAAAC GGTTGTGGTT GCACCAAGCT
AACATCAATA TGAACCAATT TGTGGTAAGA AAAATGCTTG GGGATGAGGT ATCGCCGGAG
CAAGCGCCAG TGGTGTTAGA TGAATATGCC AATACGGCAT CGGCAGGTTC TGTGATTGCA
TTTCATAAAT ATTCCAGCGA TTTTAAGGCT GGCGATTTAG GTCTATTAAG CTCCTTTGGT
GCGGGTTACT CCATCGGCAG CGTGATCCTG CAAAAACGCT AA
|
|---|
| Protein sequence | MKQVVISGSG LFTPPYSISN EALVESFNAY VDIFNLENAG LIEQGHVAAL SYSSSEFIEK
ASGIKHRYVM VKEGILDPEI MMPLIPERSS DELSMQAEIG VEAALMALNN ANLKAEQIDL
VIVACAYTQR AYPAMAIEIQ RALGTRGYGY DMQVACSSAT FAIVAAANAI ATGSASRVLV
INPEICSAQV NYRDRDSHFI FGDVATALVL EEQSLVEPNK GFTILSSRCF TDYSNNIRSN
FGFLNRCDPS SAHQADKLFH QQGRKVFKEL LPMIYQHLDE HLAEQASTPQ SFKRLWLHQA
NINMNQFVVR KMLGDEVSPE QAPVVLDEYA NTASAGSVIA FHKYSSDFKA GDLGLLSSFG
AGYSIGSVIL QKR
|
|---|
| |