Gene Sputcn32_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2355 
Symbol 
ID5080383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2719153 
End bp2720217 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content45% 
IMG OID640499523 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001183875 
Protein GI146293451 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.160596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACG CCACTATCAC AGGTTGGGGC AAGTGTGTCC CCCCCGCAAC CTTGACTAAC 
GATGATCTTG CAACTTTTAT CGAAACGTCC GATGAATGGA TTAAATCGCG CACAGGGATC 
AGTCAACGTC ATATCAGCCA TGTGAATACC TCTGAACTGG CATCCGTTGC CGCAAAGCGA 
GCCCTTGCAG CAGCGGGCAT CGATGGCAGT GAGATAGATA TGATCATTCT GGCAAGTGCC 
AGTCCAGATA CATTAATCCC CAATATTGCA TCGACGGTAC AAGCCAATAT TGGTTCAAAC 
TGCGCTGCAT TTGATATCAA CGCAGCCTGT AGCGGTTTTC TATACGGCTT AGGTTTAGCG 
AGCTCTCAAA TTAAAAGCGG CCAGAGCAAA AAAGTTTTAG TGATCGGGGC TGAACGCCTA 
TCTTTCTATT TAGATTGGTC GCGCCGTGAA ACCGCAGTAC TATTTGGTGA TGGTGCGGGT 
GCAGTTGTAG TAGAAGCCTC AACTATTCCA GGTGGTGTGC TTGGTTATGA GCTTAATAAT 
GACCCTGATG GCCGTGATAT TCTAAAAGCG GGTTTCGGTA CCGCTATGGA TAGATTCTCC 
GCCGAATCTT TAGATTTTTA TATTCAATTT GATGGGCAAG AAATCTTTAA ACGCGCCATT 
AATGGTATGA ACAAGTTAAG CACTCAAGTG CTTGAAAAAT GTGGTGTAGA TAAAGACGAA 
GTCGATTTAG TCATTCCGCA TCAAGCGAAT GAACGTATTA TCGATACACT TGTAAGTCGA 
ATGAAAATCC CGAAAGAAAA AGCCTTTGTG AATATTGCTA ACTATGGCAA TACCTCAGCG 
GCGACGATTC CGATTGCCAT TTGTGACGCC TTGGAAAAAG AACTTATCAA GCCACATCAA 
ACCATACTGT CATGCGCTTT TGGGGCCGGA TTAACTTCAG CAGCACTTCT TCTTCAATGG 
GGTGAGCGAG TGAAGCCGCT TAATATAAGT GATGCAGAGT TACCTCCTTG CGATCAAAGT 
GGTATTGAAC TGGTCAAACG TGCGGTTGAT TATTTTTGTA ACTAA
 
Protein sequence
MQYATITGWG KCVPPATLTN DDLATFIETS DEWIKSRTGI SQRHISHVNT SELASVAAKR 
ALAAAGIDGS EIDMIILASA SPDTLIPNIA STVQANIGSN CAAFDINAAC SGFLYGLGLA 
SSQIKSGQSK KVLVIGAERL SFYLDWSRRE TAVLFGDGAG AVVVEASTIP GGVLGYELNN 
DPDGRDILKA GFGTAMDRFS AESLDFYIQF DGQEIFKRAI NGMNKLSTQV LEKCGVDKDE 
VDLVIPHQAN ERIIDTLVSR MKIPKEKAFV NIANYGNTSA ATIPIAICDA LEKELIKPHQ 
TILSCAFGAG LTSAALLLQW GERVKPLNIS DAELPPCDQS GIELVKRAVD YFCN