Gene Sputcn32_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2330 
Symbol 
ID5080353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2679637 
End bp2680044 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content47% 
IMG OID640499493 
Producthypothetical protein 
Protein accessionYP_001183850 
Protein GI146293426 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAT TACGCTTAAT ATTCAACATA GCTTGGTTTG TTCTCGGCGG ATTTGTGATG 
GGACTCGCTT GGTGGCTCGC AGGTATCCTG TGTTTTATCA GTATCATTGG TATTCCCTTC
GGCCGCGCCT GTTTTGTTAT CGGCGAAATG ACCTTTTGGC CCTTCGGCCA AGAACAAATG
AACCGTCGCC ACTTAACTGG GCGTGAAGAC TTGGGCACAG GTGCATTAGG CATGGTAGGA
AATATCATTT GGTTCTTACT ATTTGGGATC TGGTTAGCCA TAGGGCATTT GGTCCACGCC
TTAGCCTGTT TTGTGACGAT TATCGGTATT CCCTTTGGGA TACAGCATCT TAAATTGGCT
TTACTCAGCC TCACACCGAT AGGCCAAACT ATCGTCGCCA AAGCCTAA
 
Protein sequence
MAVLRLIFNI AWFVLGGFVM GLAWWLAGIL CFISIIGIPF GRACFVIGEM TFWPFGQEQM 
NRRHLTGRED LGTGALGMVG NIIWFLLFGI WLAIGHLVHA LACFVTIIGI PFGIQHLKLA
LLSLTPIGQT IVAKA