Gene Sputcn32_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2329 
Symbol 
ID5080302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2678341 
End bp2679369 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content45% 
IMG OID640499492 
Producthypothetical protein 
Protein accessionYP_001183849 
Protein GI146293425 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAA ATTCCCCTGT CGATACGTTT GCCTTTGCTG GCAGAGACAT TTTCCTAAAA 
CGTGATGATT TACTGCATCC GGCGTTTAGT GGCAATAAAG CTCGCAAATT CGGCTATTTT
TTAGATCATG AGTTTACAGG CATCAGCAAG GTGATAGGTC ACGGCTCGCC ATTGGCTAAC
TCGCTGTATT CATTGTCAAC ATTAGCGAAG ATGAAAGGTT GGCAGTGTGA TTTTTATGTA
GATCATATTG CCAGTCAAGT GGTTAAACAT CCCACAGGCA ATTACGCTGC CGCCTTAGCG
AATGGCGCCA ATATTATCGA TTTAAGTGTG TTAATAGCAC AAAAGCAGGC GTGCACTCAG
CCGCAATCTG AACCTCACGT TTTGTCAAAT CTTAATGCTA GTCCTGAGCC TACTGTGCAA
GTGGGCGACG TGCGACTGAG TTGCCAAGAT TATATCGAGG CTCAAGTACT CGTGAATGAG
CCGACGGCGC TTTTTATCCC AGAGGGTGGT CGTTGTGCTT ACGCCGAATA TGGGGTGAAT
AGATTGGCGC AAGAGATAGT ACAGTTTGCG AAGGCGAATG GATTGGTTGA TTTAACGGTG
TTTTTACCTT CGGGGACGGG AACGACTGCG TTATTTTTAA ATCAGTATTT TATCCGTCAG
CAAACGGATA TTCGCGTCGT GACTTGTGCC GTTGTCGGTG GCGATGATTA TTTGCGCTTG
CAATTTTCCT TACTTAATTC CAATACCAGT GAGCATCCAC AGATTGTTAA TGTCGGCAAG
AAATATCATT TTGGTAAACT TTATCCCGAA TTTTATGCCA TGTGGCAGCG GGTCTGCGCC
TCAGGCGTGC AGTTTGAATT ACTCTACGAT CCTTTAGGTT TTATTGTGCT TGAGGAATAT
TTACAAGGCG GAGGCTCTCG TCCAGTGATG TATATTCACC AAGGTGGCTT ACTCGGGAAC
GAGACCATGT TGCCACGTTA TCAGCGTAAA TTTGGGCGAA GTGGCTCATC CTGCGCCTCT
GATCATTGA
 
Protein sequence
MFANSPVDTF AFAGRDIFLK RDDLLHPAFS GNKARKFGYF LDHEFTGISK VIGHGSPLAN 
SLYSLSTLAK MKGWQCDFYV DHIASQVVKH PTGNYAAALA NGANIIDLSV LIAQKQACTQ
PQSEPHVLSN LNASPEPTVQ VGDVRLSCQD YIEAQVLVNE PTALFIPEGG RCAYAEYGVN
RLAQEIVQFA KANGLVDLTV FLPSGTGTTA LFLNQYFIRQ QTDIRVVTCA VVGGDDYLRL
QFSLLNSNTS EHPQIVNVGK KYHFGKLYPE FYAMWQRVCA SGVQFELLYD PLGFIVLEEY
LQGGGSRPVM YIHQGGLLGN ETMLPRYQRK FGRSGSSCAS DH