| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2316 |
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| Symbol | |
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| ID | 5080289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2666670 |
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| End bp | 2667989 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499479 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001183836 |
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| Protein GI | 146293412 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000238033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATCAA ATATTGGAGT TGTCGATTTG ATTAAAATGA AAGGGTTGAC CTATCTTGCG
GCTAGCTTTG CAGCCTGCGT TAGTGTGAGT GCTTGCTCGA GTGCGCCAAC GTCCAGTGTT
AGCAGTAATA ATGCCATTGC AGATCCTAAT GCGGCACTTG CCACTGTGGA TATCAATGCC
ACAGTGCAAT TAAATGCCGA TGCCTTTGCT AGTTGCCTCA CAACGCTACA GGCACGAGCG
CGAAGTGAGG GGTTATCAGA GGAAACCATT AATAATACCG TTGCGTATTT ACAATTTGTG
CCGCGCGTGA TTGAGCTCGA CCAACAGCAA CCTGAATTTA GTCAAACTTT TGCGAATTAT
TTTACTAAGC GAGCTACCGA TTGGCGTGTC AATGAAGGGC GACGTTTATT ACAAAAGCAT
CGAGCATTGC TGGATAAGTT GTCGCTGCAG TATGGGGTAC CACCACAATA TATTCTGTCT
TTTTGGGGAC TTGAGACCAA TTATGGCTCT TACAAAGGAA AAATGGCCGT ATTGGACTCG
CTGGCAACCT TGGCCTGTGA GCCACGTCGT AGCAGTTATT TCACCACCGA ATTGATGCAA
GCACTTAAGT TAAAAGAAAA ATATCAGTTT GATAAAAACA CTATGGTGGG CTCTTGGGCG
GGGGCAATGG GGCATACACA GTTTATGCCT TCAGCCTATG CTAAGTATGC TATTGATGGC
GACGGTGACG GTAAAGTGGA TTTGTGGAAT AGCACGGCAG ATGCACTAAC CTCTGCGGCT
AATTTTTTAC AAAATTTAGG TTGGCAGCGT AATGAGCGTT GGGGGCGTGA AGTTTTACTA
CCAAAGAATT TTAGTTACAG CCATTTAGGT GCAAAACAGA CATTGCCTTT AGCTGAATGG
GCTGCGCAGT CTGTAACCCT GACTAATGGA CAACCTTTGC CACAAGCGGA TATTCAGGCT
GCATTATATT TACCCGCGGG TCATACGGGT CCTGCATTCC TAGGGTATGA AAACTTTAAT
GTGATCATGC GTTGGAACCG TTCAGAGTTC TATGCCATTA CCGTAGGACA TCTAGCGGAT
CGTATTAATG GTGGCGAGCC TCTAAAAGTT GCTCCGCCTG AACAGCCTCG TCTCAGTCGT
GAGCAAGTTA AACAACTGCA AGAAAAATTG AATGAGGCGG GGTTTGAGGT TGGTAAACCC
GATGGTGTGC TAGGACGTAA TTCAATGGCT GGGATCCAAG CTTTTCAGCG TAGTAAAAAA
ATGATTGCTG ATGGTTTCCC AAGTCCTGAG GTGTTCGCCG CTTTAGGGCT AACGCTTTAA
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| Protein sequence | MKSNIGVVDL IKMKGLTYLA ASFAACVSVS ACSSAPTSSV SSNNAIADPN AALATVDINA
TVQLNADAFA SCLTTLQARA RSEGLSEETI NNTVAYLQFV PRVIELDQQQ PEFSQTFANY
FTKRATDWRV NEGRRLLQKH RALLDKLSLQ YGVPPQYILS FWGLETNYGS YKGKMAVLDS
LATLACEPRR SSYFTTELMQ ALKLKEKYQF DKNTMVGSWA GAMGHTQFMP SAYAKYAIDG
DGDGKVDLWN STADALTSAA NFLQNLGWQR NERWGREVLL PKNFSYSHLG AKQTLPLAEW
AAQSVTLTNG QPLPQADIQA ALYLPAGHTG PAFLGYENFN VIMRWNRSEF YAITVGHLAD
RINGGEPLKV APPEQPRLSR EQVKQLQEKL NEAGFEVGKP DGVLGRNSMA GIQAFQRSKK
MIADGFPSPE VFAALGLTL
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