| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2311 |
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| Symbol | ushA |
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| ID | 5080284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2660672 |
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| End bp | 2662390 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499474 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001183831 |
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| Protein GI | 146293407 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATA AGCTTATTAA AGGATTAGTT GCAACGGCTG TGCTTGCAGC TCTCGCAGGT
TGTAACAATA GTGATGATGA TAAAATTCCA ACAACATGTG CTGAAGCAGG GAGTGCGTGT
AAAGCATTCA CTATTTTACA TACCAATGAT AACCATGGTC GTTTCTGGGA AAACAGTGAC
GGCGAATATG GTTTAGCAGC GCAGAAAACA CTTGTAGACC AGATTCGTGC TGAAGTGAGC
AAGAATGGCG GTCAAACTTT ATTATTATCG GGTGGTGATA TCAATACTGG TGTACCAGAA
TCAGATTTAC AAGATGCTAT TCCTGATTTT ACCGGTATGA ATAAAATTGG TTATGACGCA
ATGGCCGTTG GTAACCATGA ATTTGACAAT CCGTTATCAG TACTTGATAT GCAGCGCCGT
CTTGCAGAAT TTCCAATGTT GGCTGCCAAT ATATACCGTA AAAATACCGA TGGTAGTCAA
GGTGAGCGCT ATTTTGATGC CTATAAAATT TTTAATGTTA ACGGTTTAAA AATTGCTGTC
ATCGGTTTAA CTACCGAAGA TACTGCTAAA ATTGGTAACC CTGAATTTAT TAGCGATCTG
ATTTTTACTG ATCCCAAAGT TGAAATTGCT AAGGTCATCA AAGAAATTAA AGATGCCAAA
TCGGCTGATA TTATTTTCGC AACGACACAC ATGGGCCACT ATGCTGACGG TCAAAATGGC
AGTAACGCTC CAGGTGATGT TGCTCTCGCA CGCGCGCTGA AAGAAGGTGA TTTGCAAGTT
GTTATTGGTG GCCACTCACA GAATCCTGTT TGTATGGAAT CTGGCAGTGA AAACAAAGTT
TACGCCGATT TTAAGCCGGG TGATGAGTGT GCTCCAGATA AGCAAAATGG TACGTGGATT
ATGCAAGCCC ATGAATGGGG TAAATATGTA GGCCGAGCTG ATTTTGAATA TTTCAACGGT
GAGCTACATC TAGCAAGCTA CAAACTTGTG CCTGTTAACA TGCGTAAACT GGATGAGAAA
GGTGCTAAAA CTACCGAGTT AGCTGGTGCT AAAATTGAAC CAGATAGTGA GTTAAAAGAG
TTACTGTCTT ACTATCAAGA AAAAGGGCAA GCTAAGCTAG ATGAAGTGAT TGCAACGACG
GATGCCCTGT TAGATGGTGA ACGCGCAAAC GTGCGTAATA AACAAACTAA CTTAGGCCGT
ATGTTAGCGA TGGCGCAAAG TGGTAAAGTG TCTGCAGACT TCGGTGTGAT GAACTCGGGA
GGTGTGCGCG CCTCTATCAA AGCAGGTAAC ATTACTTACC GTGACGTACT TACCGTTCAA
CCGTTTGGTA ACATGGTGAC ATTGAACGAA ATGACTGGGA CTGAAGTTGC TGCATACTTA
GGCGTAGTGG GCAGTCTTCA AATTGGATCC GGTGGTTATG CACAAATCAC AGGTGTGAAA
ATGACCATTG ACTGTGTGGC TAAGACCGCC AATATCAGTC AAATCAATGG TAAAGATTTT
AGTGCCGGAG CAACCTATAA ATTCACTGTG CCGAGTTTTA ATGCTGCTGG TGGTGACGGT
TATCCGAAAT TAGCAAGCCC AATTCAAACG GGTTATGTTG ATGCTGATTT ACTGTATACA
TTCTTAAAAG ACAAACAAAC GATCGTTGCT GCAGACTATA ATCCTGTAGG CGACATCGTT
TATGAAAACT CATCAAGTGT TGAAGGTTGT AAACTGTAA
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| Protein sequence | MINKLIKGLV ATAVLAALAG CNNSDDDKIP TTCAEAGSAC KAFTILHTND NHGRFWENSD
GEYGLAAQKT LVDQIRAEVS KNGGQTLLLS GGDINTGVPE SDLQDAIPDF TGMNKIGYDA
MAVGNHEFDN PLSVLDMQRR LAEFPMLAAN IYRKNTDGSQ GERYFDAYKI FNVNGLKIAV
IGLTTEDTAK IGNPEFISDL IFTDPKVEIA KVIKEIKDAK SADIIFATTH MGHYADGQNG
SNAPGDVALA RALKEGDLQV VIGGHSQNPV CMESGSENKV YADFKPGDEC APDKQNGTWI
MQAHEWGKYV GRADFEYFNG ELHLASYKLV PVNMRKLDEK GAKTTELAGA KIEPDSELKE
LLSYYQEKGQ AKLDEVIATT DALLDGERAN VRNKQTNLGR MLAMAQSGKV SADFGVMNSG
GVRASIKAGN ITYRDVLTVQ PFGNMVTLNE MTGTEVAAYL GVVGSLQIGS GGYAQITGVK
MTIDCVAKTA NISQINGKDF SAGATYKFTV PSFNAAGGDG YPKLASPIQT GYVDADLLYT
FLKDKQTIVA ADYNPVGDIV YENSSSVEGC KL
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