| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2309 |
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| Symbol | |
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| ID | 5080282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2658923 |
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| End bp | 2659876 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499472 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_001183829 |
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| Protein GI | 146293405 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.433323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTGTGA TTTTGGCTCC AATGGAAGGT GTGGTAGACG ATTTGATGCG TGACATTCTC
TCAGCAATCA ATCCCTACGA CTTACTTGTC ACTGAATTTG TACGAGTGGT AGATCAACTT
CTGCCAGAGA AAGTTTTTCT TAAACTTTGC CCTGAATTAC ACAATCAGGG GAATACACCA
TCAGGTACGC CAGTACGTGT TCAATTACTC GGTCAAGAAC CCCAATGTAT GGGAGAAAAT
GCCCTACGAG CAGTAGAGCT AGGTTCCCAT GGCGTCGATG CCAACTTTGG TTGTCCGGCG
AAAATGGTTA ACCGCAGTAA CGGTGGCGCT GTACTCCTGC AATATCCAGA TAGTATTCAC
GATATTGTCC GCGCAATGCG TCAAGCCGTG CCTAGCGAGC ACCCTGTTAC GGCAAAAATC
CGCCTAGGTT ATGAAGATAA GTCACTCTTT ATGGAAAATG CCTTGGCTGT CTATGAAGCG
GGGGCAACCG AACTTGCCAT TCATGCACGC AGTAAAGTTG ATGGCTATAA ACCTCCCGCC
TATTGGGAAT ACATTACTGA AGTGAGAAAA CGTCTGCCTA TCCCAGTGAT TGCTAACGGG
GAAATTTGGA ACAGTGATGA TGCCAAGCGT TGTATGGCCG TGACTGGCTG CGATAGCATT
ATGATTGGTC GTGGCGCCAT TTCATTGCCC AATTTAGCTG ACACCATAAA AACAGGAGCC
GCACCTTATA CTTGGGCGCA AACCTTAGCA CTTATGCTCA GTTATACTCA AAGGGAACTC
AATGGCCGTA AAAGCGATTA TTACCCCGCC CGAATCAAAC AGTGGTTTAC CTACCTCAAT
CGACAATATC CTGAAGCGGA TACCCTTTTT AGAACATTAA GAGTCCATAA AACAACCGAA
GACATCGTCA GAGAACTTGA AGCGGCACAC AATGCTTTAC CAAAAACACA TTAA
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| Protein sequence | MRVILAPMEG VVDDLMRDIL SAINPYDLLV TEFVRVVDQL LPEKVFLKLC PELHNQGNTP
SGTPVRVQLL GQEPQCMGEN ALRAVELGSH GVDANFGCPA KMVNRSNGGA VLLQYPDSIH
DIVRAMRQAV PSEHPVTAKI RLGYEDKSLF MENALAVYEA GATELAIHAR SKVDGYKPPA
YWEYITEVRK RLPIPVIANG EIWNSDDAKR CMAVTGCDSI MIGRGAISLP NLADTIKTGA
APYTWAQTLA LMLSYTQREL NGRKSDYYPA RIKQWFTYLN RQYPEADTLF RTLRVHKTTE
DIVRELEAAH NALPKTH
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