Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2302 |
Symbol | |
ID | 5080275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2652046 |
End bp | 2654919 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499465 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001183822 |
Protein GI | 146293398 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000141755 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATATC AGGTGTTAGC CAGAAAATGG CGCCCTGCCA CATTTGAACA AATGGTTGGT CAAAGCCATG TATTGCATGC CTTAACCAAT GCACTAAGTC AACAGCGTTT ACACCATGCT TACCTGTTTA CAGGGACGCG AGGCGTAGGT AAAACCAGCT TAGCGCGACT CTTTGCCAAA GGCTTAAATT GCGAACAAGG TGTCACTGCC ACCCCCTGCG GCGTATGCGG TAGTTGTGTT GAAATTGCCC AAGGTCGATT TGTCGATTTA ATTGAAGTTG ATGCAGCGTC CCGCACGAAG GTCGATGATA CGCGCGAGCT GCTGGACAAT GTGCAGTATC GCCCGACCCG TGGCCGTTTT AAGGTTTATC TTATCGACGA AGTGCATATG CTGTCGCGCA GCAGTTTTAA CGCACTGCTT AAGACCTTAG AAGAACCCCC TGAGCACGTT AAATTTCTCC TCGCGACAAC AGACCCACAG AAACTACCCG TGACTGTGTT ATCCCGTTGT TTACAATTTA ATTTAAAAAG TTTGACCCAG CAGGAAATTG GCACTCAACT TAATCATATT TTGACCCAAG AGCAGTTCCC CTTTGAGGTT GAAGCGCTAA CACTCCTTGC CAAAGCCGCC AATGGTAGTA TGCGTGATGC GTTGAGCTTA ACGGATCAGG CCATTGCTTT TGGTGGTGGT ACTGTGATGC TCACACAAGT GCAGACCATG CTTGGTAGTA TTGATGAGCA ACACGTTATC GCCTTACTGA AAGCCTTAAC GGATGCCGAT ATCACAGTAC TAATGCAAAC CAGTGCCCAA GTGCTCGCGT ACGGCGCCGA TGCCCAAGAA GTGCTGCGCA GTTTGCTTGA GCTGTTACAT CAAATTACTC TAACGCAGTT TGCCCCCGCT TGTGCGCAGC AGTCCTTATA CAGCGCACAA ATTCGTGCTT TTGCTGAGCA ATTAACGCCG GAGCAAGTAC AGCTTTATTA TCAGATCCTA TTAACGGGTC GCAAGGATTT ACCCCATGCC CCCGATCCTA AATCAGGCCT AGAAATGGCA CTCTTACGGG CCGTTGCCTT TGTGCCAGAA AAGCCCGTTA AACGCTGGCA AGTCGAATCG CCAGCCGAGG TGAGTTTACC CGTAGGGCAA ACGTCACCTT CATTGGCGGC GTTAGCGACA TCGGTAGCTG AAAAAAAAAC AGATTTAGTT GAACAACCTA CAGATGTTAA CGTACATGCT GCAGTTGAGA TTAATGCACC TTCGGATACA GCAGATAGCG CTTTGTTCGC AGAGCAAACG CTGATCATTA GCCAAGCCCT AAGTCAGGGA TATAAGTTAT CTGAATCCAT TGCACCAACA AGCATCGAGG TACCTGTCGC TGCGATATCG CAAAGTGAAG ATACCAAAGT CGAAACACTG GTCTCAACCA ATGAGCAGGC AGTTGTAAAT AACACTGACA GTGATACCCA ATTAGATTAT GTCTATGGCC ATGGGGATTA CACCCAAGAT GTCGCGCCAT TGGATATTTA TCAAGATGAT TATGCGAGCT TTTCTTCTGA GTCATACAGT TCGTTGACTC AGGAAATGGT GGCTGAACAA GCGACTATTA ACCCTGTTAG CCCTGCAACT CAAACCTCAA CTCAAGTTGA AAATACCACT GGAGTCACCA TTCCAACCGC CACAGGCATC GCAGTGGATC CCTCTTTAGG GCAATCCAGT TTCAAGCAAA CTGCCACAGC CTCGTTGGAG GATGACGATA TTTTATCGGC GGTATTAGCT GCAAGAGAGT CGCTGTTGTC GGATCTCGAT GCCTTGAGCG CGAAGGATGG TGATGAAAAA AAGCCTTCAC TGGATTTTAA ACGTAAAGAG CCAACAATTG GCCCGTTATC TGCCACCAGA TCAGATATAA CCACTTCTCC TAAAGCGGTA AAGGCGGTAT CTCAGTCTGT AGAATCCATT GACTCAGAAT TTGATTTTGA CGATGATTTT GAGCCCGTGC CACAGAGGGA TGGAGGGTTC GCTCAAAGCG TTACACAAGC AAACAAAAAT CCAGAAGCAT CGCAACCTTT AACACAAAAT GGGCAAATAA CACAAAATGG GCAAAAACCT TCGGGGGAAA AGCCCGTCAG CGTCGATGAT CCCAATGATC GTCCGCCTTG GGAGGCTGCC CCAGCTACAA ATATGCAGCA TCCTGTGGTA CACCCTGTTT CAGCGTTGGA GCCAGTAGTT CCTACTGCAA TGCAAGATGA ATTGGCACCA ATTGATCAGG CGCCCCATAC GCCCGTTTCA CTTATGAGCG AGCCTATAGA GGATGCAGCC AAGGAATCAT TAACTGAACC AGTAACGGGT TTGTCGAATC AAACCGGACT GAGTGTAGTG CAGCCAGTCA GTGGTAATCC ATTGGATTTA CATTGGTATA AGTTAATGGC GAGTTTAGAT ATTGGCGGTC GAGTACGCCA ACTTGCGGTT AATTCAGTAT GCCAAGCGCA AAGCGATCCA CTGCCATTAC TGTTAAAACC CGATCAAAAA CACTTAGCAG CCGATGTCGC AATCGTGCAA TTAGAACAAG CATTGACGGT GGCGCTCGGG AATCCAAGGC GAGTACAAGT AGTCATAGGA AGCGATCCAA AGCGGGAAAC ACCCCTTGAG TTACGTAAGC GTTTTCATCA AGAACTATTA CAACGGGCAC AGCAGTCATT AATTAAAGAC GATAATGTTC AATGGCTTAT TCAGCGTTTG GGTGCAGAGC TTGATACCGA TACTTTAGTG TATCCTCCCG ATCTGTTAAA CCAACGGAGC CAGCAGATCC AAGCGTTACC TGAACCAGAG TTGACGAATG AGTTCACTCA GAGCGAGGGT AAACTAGCGC TAAGTAAGGC TTAA
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Protein sequence | MSYQVLARKW RPATFEQMVG QSHVLHALTN ALSQQRLHHA YLFTGTRGVG KTSLARLFAK GLNCEQGVTA TPCGVCGSCV EIAQGRFVDL IEVDAASRTK VDDTRELLDN VQYRPTRGRF KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTVLSRC LQFNLKSLTQ QEIGTQLNHI LTQEQFPFEV EALTLLAKAA NGSMRDALSL TDQAIAFGGG TVMLTQVQTM LGSIDEQHVI ALLKALTDAD ITVLMQTSAQ VLAYGADAQE VLRSLLELLH QITLTQFAPA CAQQSLYSAQ IRAFAEQLTP EQVQLYYQIL LTGRKDLPHA PDPKSGLEMA LLRAVAFVPE KPVKRWQVES PAEVSLPVGQ TSPSLAALAT SVAEKKTDLV EQPTDVNVHA AVEINAPSDT ADSALFAEQT LIISQALSQG YKLSESIAPT SIEVPVAAIS QSEDTKVETL VSTNEQAVVN NTDSDTQLDY VYGHGDYTQD VAPLDIYQDD YASFSSESYS SLTQEMVAEQ ATINPVSPAT QTSTQVENTT GVTIPTATGI AVDPSLGQSS FKQTATASLE DDDILSAVLA ARESLLSDLD ALSAKDGDEK KPSLDFKRKE PTIGPLSATR SDITTSPKAV KAVSQSVESI DSEFDFDDDF EPVPQRDGGF AQSVTQANKN PEASQPLTQN GQITQNGQKP SGEKPVSVDD PNDRPPWEAA PATNMQHPVV HPVSALEPVV PTAMQDELAP IDQAPHTPVS LMSEPIEDAA KESLTEPVTG LSNQTGLSVV QPVSGNPLDL HWYKLMASLD IGGRVRQLAV NSVCQAQSDP LPLLLKPDQK HLAADVAIVQ LEQALTVALG NPRRVQVVIG SDPKRETPLE LRKRFHQELL QRAQQSLIKD DNVQWLIQRL GAELDTDTLV YPPDLLNQRS QQIQALPEPE LTNEFTQSEG KLALSKA
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