| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2301 |
|---|
| Symbol | |
|---|
| ID | 5080274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2651547 |
|---|
| End bp | 2651876 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499464 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183821 |
|---|
| Protein GI | 146293397 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000177847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGAA AAGGCGGTAT GGGCAATCTG ATGAAACAAG CCCAGATGAT GCAAGAAAAA
ATGGCGAAGA TGCAGGAAGA AATTGCGCGC ATGGAAATGG TGGGCGAATC GGGTGCTGGT
CTAGTCAAAG TCACTATGAC GGGTGCACAC ACAGTGCGTA AAGTCGAAAT CGACCCAAGT
TTGATGGAAG ACGATAAAGA AATGCTGGAA GATTTGATTG CTGCGGCCTG TAACGATGCA
GCACGTCGAA TCGAAGAGAA TCAAAAAGCT AAAATGGCTG AAGTGACTGG CGGTATGCAA
TTACCACCAG GCATGAAAAT GCCGTTTTAA
|
|---|
| Protein sequence | MFGKGGMGNL MKQAQMMQEK MAKMQEEIAR MEMVGESGAG LVKVTMTGAH TVRKVEIDPS
LMEDDKEMLE DLIAAACNDA ARRIEENQKA KMAEVTGGMQ LPPGMKMPF
|
|---|
| |