Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2292 |
Symbol | |
ID | 5080264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2641136 |
End bp | 2642002 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499454 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001183812 |
Protein GI | 146293388 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000123532 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATC CACAATGGTT ACACACATTT GCCGTTTTAG TCGAAAAAGG TAATTTTACC CGCACGGCAG AAGCCATTGG TATAACCCAA GCGGCAGTCA GCCAGCATAT CAGTCGCTTA GAAGAAGAAT ATGGCACCTT ATTTTTACGA CGAACGCGCC AGCTTGAAAT AACGCCAATA GGCGAAAATT TACTCACCTA TGTAAAAGAA GTAGAATGCG CGGAAAAACG ATTACGACAA AAACTGATCA AAGATGACAC CGACGTCGGT GATATCAGTC TTATCACACC AGGAAGCATA GGCTTAACAC TTTTCCCATT GTTATTGGAG TTACAAACTG CTTTTCCCGC CTTAAATATA CGACACCGCT TTGCACCAGA TAACGAAATC CTAACATCCG TTCTAGCCAA TCAGCATGAA ATTGGTATGG TGACGTTAAA GCCCTCTGAT CCTCGGATTT TCAGTACTTA CTTTACCGAA GAACCTTTAG AGTTAGTCGT ACCTGCCGGC CATAAAATTA ACACATGGCA GGACTTACAA CGGTTAGGCT TTATCTCTCA TCCTGACGGT GAAGCCATGG CCATGAGGTT ACTGACCCGA AAGTATCCTG GTTGTCCCAA TATTCAAGAG CTCCCCTGCA AAGGGTTTAC CAATCAAATT AGCCTTATTC TTGAACCTGT TGCTAGAGGC TTAGGCTTTA CCGTTATACC AAGATATGCA CGTAAAGCTT TTGAGCGGCA AGAAGATATT TATGTAGTGG AATGTGGCAT CCAAGTGGTT GATACCATTT GGCTTATTCA CCGCGCAGAA TGGCCCTTGT CGCGCCGAGC CCAAAAAGCA GTCGAGTTCC TTAAAAGCAG AATATAA
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Protein sequence | MINPQWLHTF AVLVEKGNFT RTAEAIGITQ AAVSQHISRL EEEYGTLFLR RTRQLEITPI GENLLTYVKE VECAEKRLRQ KLIKDDTDVG DISLITPGSI GLTLFPLLLE LQTAFPALNI RHRFAPDNEI LTSVLANQHE IGMVTLKPSD PRIFSTYFTE EPLELVVPAG HKINTWQDLQ RLGFISHPDG EAMAMRLLTR KYPGCPNIQE LPCKGFTNQI SLILEPVARG LGFTVIPRYA RKAFERQEDI YVVECGIQVV DTIWLIHRAE WPLSRRAQKA VEFLKSRI
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