Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2281 |
Symbol | |
ID | 5080253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2630353 |
End bp | 2631222 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640499443 |
Product | Ion transport protein |
Protein accession | YP_001183801 |
Protein GI | 146293377 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.87963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAT CATTACCTGA AAAAATCGAC AGCGAAACCC CATTAAAACG CCAATTACGG ACGATTATTT TTGGAACTGA TACGCCTGCA GGACGTTACT TTGATATTGC TTTGATGATT TGTATTGCGT TGAGTGTCGG GTTGGTATTC CTTGATACGG TTGAAACTGT TCATCGGGAT TATGGAGATC TCATTCTATT CTTGGAATGG GGCTTTACTA TTATTTTCAC TATTGAGTAT GGGCTAAGGT TGTACTGCGC AACTCATCCA GTGTTATATG CACGTAGTTT TTATGGCCTT GTGGATTTAC TCTCCATACT CCCAACTTAT TTATCGCTCT TTATCCCAGG TGCAAACTTG ACTCTCGTGA TCAGAGTATT GCGTCTCTTT AGAATTTTTC GTGTACTTAA GCTATTGCGT TATTTAAGCG AAGGGAATGT ACTGCTAAGG GCGATGATAC AGTCTAGTCG TAAAGTGTTT TTATTTTTCT TTTCGGTTAG CTTGATCATT ATGGTGCTTG GCGCAGTGAT GTATGTAGTC GAAGGACCCG AAAATGGCTT TAGCTCTATC CCTAAATCTG TGTATTGGAC CATAGTGACA CTTACAACGG TAGGTTATGG CGATATCACG CCCAAAACAG GATTGGGCCA AGCGATAGCG GCGTTTACTA TGCTATTGGG ATATTCGATT ATTGCTATTC CTACGGGGAT TTTGACGGCT GAAATATCCC AAGAGGTTGG GCGCCATCGA GATTTACGCT CCTGTAACCA GTGCCATAAG TCAGGCCATG ATCTTGATGC AATGTATTGT AGCCGTTGTG GTTGTGAGCT TGATTTGCTT GACTCTTCAA CGGCAAAGAA CGCAACTTAA
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Protein sequence | MSESLPEKID SETPLKRQLR TIIFGTDTPA GRYFDIALMI CIALSVGLVF LDTVETVHRD YGDLILFLEW GFTIIFTIEY GLRLYCATHP VLYARSFYGL VDLLSILPTY LSLFIPGANL TLVIRVLRLF RIFRVLKLLR YLSEGNVLLR AMIQSSRKVF LFFFSVSLII MVLGAVMYVV EGPENGFSSI PKSVYWTIVT LTTVGYGDIT PKTGLGQAIA AFTMLLGYSI IAIPTGILTA EISQEVGRHR DLRSCNQCHK SGHDLDAMYC SRCGCELDLL DSSTAKNAT
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