| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2274 |
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| Symbol | gltA |
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| ID | 5080246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2618727 |
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| End bp | 2620013 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499436 |
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| Product | type II citrate synthase |
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| Protein accession | YP_001183794 |
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| Protein GI | 146293370 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000358341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATT TAAGAGCCAA ATTAGAATTA CCAGGGAACG ACTCGATAGA ATTGCCAGTA
AAGCAGGGAT CCGCTGGTTT TGATGTAATC GATATCAGTA AACTTGGCAG CAAAGGTTAC
TTTACCTTTG ATCCAGGTTT TCTCGCGACA GCCTCCTGTG AATCTGCAAT AACCTATATC
GATGGCGATC AAGGTATATT GTTACACCGT GGCTATCCAA TTGAGCAACT CGCCGTTGAC
TCCGATTACC TAGACCTGTG TTATCTGTTG CTTTACGGTG AACTGCCGAC GAAAGCGCAA
TATGCTGAGT TTGTACATAC AGTAAAAACC CACACTATGG TCCATGAGCA GCTAGCCTTC
TTCTTTAGAG GCTTCCGTCG TGATGCTCAT CCTATGGCGA TGTTATGTGG TGTGACTGGT
GCATTGTCTG CATTTTACCA AGACTCACTC GATGTCAACG ATCCTCGCCA CCGCGAAATC
GCCGCTTATC GCCTAGTCTC CAAAATGCCA ACGATTGCTG CTATGTGCTA CAAGTATTCT
TCAGGCCAAC CATTCGTTTA CCCACGTAAT GACTTGAGCT ATGCAGGCAA CTTCTTAAGC
ATGATGTTTG CAGTGCCGTG TGAAGAGTAC AAAGTAAATC CAATTGTTGA ACGCGCTATG
GACAGGATCT TCATTTTACA TGCCGATCAT GAACAAAATG CATCAACCTC AACCGTACGT
TTAGCCGGTT CTTCAGGTGC CAATCCATTT GCCTGTATTG CAGCGGGTAT TGCTTCACTG
TGGGGTCCTG CTCACGGCGG TGCCAATGAA GCATGCTTAC AAATGTTGGA AGAAATCGGT
TCTGTAGACC GTATTCCTGA ATTCATTGAA CGGGCGAAAG ACAAGAATGA TCCATTCCGT
CTGATGGGCT TTGGACACCG TGTTTACAAA AACTTTGATC CTCGTGCCAA AGTGATGCGT
GAAACCTGTC ATGAAGTGTT AAAAGAGCTA AAAGTACAAG ATCCACTGTT AGATGTAGCA
ATGGAACTTG AACGTATTGC CCTTGAGGAT GAATACTTTA TTTCTAAAAA GCTGTATCCA
AACGTCGATT TCTACTCTGG CATCATCATG AAAGCCATTG GTATTCCGAC CAGTATGTTC
ACTGTGCTGT TCGCACTGGC CCGTACTGTA GGCTGGATTG CCCACTGGAA AGAAATGTTA
GATCAACCCG GTCATAAGAT CAGCCGTCCA CGTCAATTGT ACACTGGCGA AGTCGCACGC
GATTTTGTTG ACTTAGACAA ACGCTAA
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| Protein sequence | MADLRAKLEL PGNDSIELPV KQGSAGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI
DGDQGILLHR GYPIEQLAVD SDYLDLCYLL LYGELPTKAQ YAEFVHTVKT HTMVHEQLAF
FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDPRHREI AAYRLVSKMP TIAAMCYKYS
SGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIVERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLQMLEEIG SVDRIPEFIE RAKDKNDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLKEL KVQDPLLDVA MELERIALED EYFISKKLYP
NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGEVAR
DFVDLDKR
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