| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2270 |
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| Symbol | sdhB |
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| ID | 5080242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2615088 |
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| End bp | 2615795 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499432 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001183790 |
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| Protein GI | 146293366 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0879984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTGG AATTTGCAGT TTATCGTTAC AATCCTGATG TAGATACTAA ACCATACATG
CAGGATTACA GCTTAGAAGT GGCAGATGGC TCAGACATGA TGGTGCTTGA TGCACTGATT
AAGTTAAAAG AGCAAGATCC GACACTATCA TTCCGCCGCT CATGCCGTGA AGGTGTGTGT
GGTAGCGATG GCGTGAACAT GAATGGTAAA AATGGTCTGG CGTGTATTAC CCCGATTTCA
ACCTTTAAAG GTAAGAAATT GGAGATCCGT CCGTTACCAG GTATGCCTGT TGTGCGTGAC
TTAGTGGTTG ATCTTACTCA GTTCTATAAG CAGTATGAGA AGATCAAGCC TTATCTCATC
AATGATGAGA AAATGCCTGC CCGTGAACAT TTACAATCCC CTGAAGAGCG TGCTCATTTA
GACGGGTTGT ACGAATGTAT CATGTGTGCA TGCTGTTCTA CGGCTTGTCC ATCATTCTGG
TGGAACCCTG ATAAGTTTAT CGGTCCTAGC GGTTTGCTCC ATGCATACCG TTTCTTGATC
GACAGTCGCG ATACAGCTAC AGAAGAGCGT TTATCTGAGC TGGACGACGC CTATAGCGTG
TTCCGTTGCC ACGGCATCAT GAACTGCGTT GATGTGTGTC CAAAAGGTCT TAATCCGACT
AAAGCAATTG GTCATATTAA GTCCATGCTG TTGAAGCGAG CAGTGTAA
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| Protein sequence | MKLEFAVYRY NPDVDTKPYM QDYSLEVADG SDMMVLDALI KLKEQDPTLS FRRSCREGVC
GSDGVNMNGK NGLACITPIS TFKGKKLEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPYLI
NDEKMPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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