Gene Sputcn32_2257 details

Gene Information

• Locus tag: Sputcn32_2257
• ID: 5080229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 2601641
• End bp: 2602336
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640499419
• Product: prolyl 4-hydroxylase, alpha subunit
• Protein accession: YP_001183777
• Protein GI: 146293353

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTTTA TTGAAGTATA CCCTAATGCG TTACCAGATG ACCTGTGTGA CCGTCTGATT 
TTAGCATTTG ATCAACATAC TGGTGTTGTC GATGGACAAA CAGGAAATGG TGTTGACCCA 
GAAAAGAAGA TCAGCCGAGA TTTAACCTTA GATAATTTTG ACGATATGCA GCCCTTAAAA 
AATGAGCTTT TAAGTTATAC CTTAAAAGGA GTTGTCGATT ATTTTACTCA GTATTCTATG 
GCATTAATGG GGGCGGTGGC GGTATCAGTA AGTGATGCTG AGGGAAAGCC TACGACCTTA 
ACCCCCTCAA ATTTTGCTCA GTTGGGATTG CCTAAGGTTG ATGGGCTAGT TAAATATTTG 
TATCGCAGTG GCAGTATCAA TATTCAAAAA TATCAGCGTA ATAAAGGTGG TTATCCCCAC 
TGGCATTCAG AACAGTTTCC ACAAAGTGGC CATAATGAGG CCTTACACCG TGTTGTGTTT 
TATATGTTTT ATCTTAATGA TGTTGAGGAG GGGGGAGAAA CGGAGTTTTA CTACCAACGA 
CGTAAAATTA GTCCTAAAAA AGGCACTATG GTTATAGCGC CAGCAGGGTT TACCCATTCC 
CACCGTGGCA ATATGCCTAT CAGTAATGAT AAATATATTG CAACATCTTG GGTCATGTTT 
AACCGTGCTG AGCAATTATA TACGGTATAC GCTTAA 

 

Protein sequence

MDFIEVYPNA LPDDLCDRLI LAFDQHTGVV DGQTGNGVDP EKKISRDLTL DNFDDMQPLK 
NELLSYTLKG VVDYFTQYSM ALMGAVAVSV SDAEGKPTTL TPSNFAQLGL PKVDGLVKYL 
YRSGSINIQK YQRNKGGYPH WHSEQFPQSG HNEALHRVVF YMFYLNDVEE GGETEFYYQR 
RKISPKKGTM VIAPAGFTHS HRGNMPISND KYIATSWVMF NRAEQLYTVY A