Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2255 |
Symbol | |
ID | 5080227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2599610 |
End bp | 2600284 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640499417 |
Product | two component transcriptional regulator |
Protein accession | YP_001183775 |
Protein GI | 146293351 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.39138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTT TGGTTGTTGA AGATGATGTT ATTTTATCCC ACCACCTAAA AGTACAACTA AGCGATTTAG GCAATCAGGT ACAAGTTGCC CTCACGGCTA AAGAAGGGTT TTATCAAGCC ACGAATTACC CCATCGATGT TGCGATTGTC GACTTGGGCT TACCAGACCA AGATGGGATC AGCCTTATTC AGCAACTGCG TGACGCAGAA CTCAAAGCCC CTATTCTGAT CTTAACAGCG CGAGTAAACT GGCAAGATAA AGTGGAAGGT CTCAATGCTG GTGCTGACGA CTATTTAGTC AAACCTTTTC AAAAAGAAGA ACTTGTTGCT AGGCTAGATG CTTTAGTACG CCGCAGTGCT GGATTCGTTA AACCGGTTAT CACAAGTGGG GAGTTAAAAC TTGATCTCGC CGCAAAACAA GTCACGCTTG CCAATGAAGT GATGGAAGTC ACCGCTTTTG AATATTTAAT TCTCGAATAT TTAATGCGTC ATTGCCATGA AGTTGTCGCT AAGCAACGTT TACTCGATGT GATTTATGGC GATAAAGAAG GAGACCCCAA TACAATTGAA GTGATGGTGA GTCGTCTACG TAAAAAACTT ACCCGAGATG GTATAGATAA TCCTATAGTA ACAATTCGTG GCCAAGGATA TAAATTTAAC CTGCCATGCA ACTAA
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Protein sequence | MRILVVEDDV ILSHHLKVQL SDLGNQVQVA LTAKEGFYQA TNYPIDVAIV DLGLPDQDGI SLIQQLRDAE LKAPILILTA RVNWQDKVEG LNAGADDYLV KPFQKEELVA RLDALVRRSA GFVKPVITSG ELKLDLAAKQ VTLANEVMEV TAFEYLILEY LMRHCHEVVA KQRLLDVIYG DKEGDPNTIE VMVSRLRKKL TRDGIDNPIV TIRGQGYKFN LPCN
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