Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2253 |
Symbol | |
ID | 5080225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2597587 |
End bp | 2598912 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640499415 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001183773 |
Protein GI | 146293349 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCT CGCTTAAAAA TAAACTCGGT CTCACAAGCA AAATTCTGTT AGGTATGGCA AGTGGTATTC TCTTTGGACT TTTGCTTCGT AGCGCTTTCC CTGAAAGTGT GTTTGTGAAA GATTATATAA CCGAAGGTTT TTTGCATGTT ATCGGCACTA TTTTTATCTC TAGTTTAAAA ATGTTAGTGG TACCTTTAGT GTTTATCTCT CTCGTTTGTG GGACATGCTC ACTCAGTGAA CCATCAAAAC TCGGCCGTTT AGGTGGCAAA ACATTAGCCT TTTACTTATT TACAACTGCA ATTGCTTTAA CTATCGCAAT TATCAGTGCA GTGATTGTTC ATCCAGGTAA CGCATCGTTA GCTACAGAAA AAATGCACTA TGTTGCTAAG GATGCACCTG GATTAGCTGA TGTATTAATT AGCATAGTGC CAACCAATCC GATGCAAGCA ATGAGTGAAG GAAATATGCT GCAAATTATT ATATTTGCAG TGATTTTCGG ATTTGCTATT GCGCATATTG GTGAGCGAGG TAAGCGAGTT GCCGTATTAT TTGAAGATTT AAATGAAGTG ATAATGCGCG TCGTTACCTT AATTATGCAG TTAGCACCTT ACGGTGTATT TGCGCTGATG GGAAAACTCG CATTAACCTT AGGTCTTGAG ACTTTTGGAA GTGTCGTAAA ATACTTCTTT GTAGTACTCG TTGTATTATT AGTCCATGCC TTTGTTGTCT ACCCAATGTT ACTCAAGCTT CTCTCGGGGC TAAACCCGCT TATCTTTATT CGCAAAATGC GCGATGTGCA GCTTTTTGCA TTTTCAACGG CAAGTTCAAA TGCAACCCTA CCGATTACAA TTGAAGCTTC TGAACACAGA TTAGGTGTCG ATAATAAAAT AGCCTCTTTC ACTCTCCCCC TTGGTGCAAC CATCAATATG GATGGCACCG CAATTATGCA AGGTGTCGCC ACGGTATTTA TCGCCCAAGT GTTTGGAATT GAATTAACAC TGACCGATTA TGCCGCCGTT GTAGTCACAG CAACTCTGGC ATCTATCGGC ACGGCAGGAG TACCTGGTGT CGGTCTTATT ATGCTGGCCA TGGTTCTCAA TCAAGTGGGT TTACCTGTAG AAGGTATCGC ATTGATCATT GGTGTTGACC GCTTACTCGA TATGGTGCGT ACCGCCGTTA ACGTTACCGG TGATTGTGTC GCCACTGTTG TGATAGCTAA ATCTGAAGGC GAATTTAATG AAACTGTGTT TAATAACACT CAAGCAGGGA AAGTTGCACG AAGCTTTGAT GAACAAGTAC ACCTACTGGA TAATTCAAAA AACTAG
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Protein sequence | MATSLKNKLG LTSKILLGMA SGILFGLLLR SAFPESVFVK DYITEGFLHV IGTIFISSLK MLVVPLVFIS LVCGTCSLSE PSKLGRLGGK TLAFYLFTTA IALTIAIISA VIVHPGNASL ATEKMHYVAK DAPGLADVLI SIVPTNPMQA MSEGNMLQII IFAVIFGFAI AHIGERGKRV AVLFEDLNEV IMRVVTLIMQ LAPYGVFALM GKLALTLGLE TFGSVVKYFF VVLVVLLVHA FVVYPMLLKL LSGLNPLIFI RKMRDVQLFA FSTASSNATL PITIEASEHR LGVDNKIASF TLPLGATINM DGTAIMQGVA TVFIAQVFGI ELTLTDYAAV VVTATLASIG TAGVPGVGLI MLAMVLNQVG LPVEGIALII GVDRLLDMVR TAVNVTGDCV ATVVIAKSEG EFNETVFNNT QAGKVARSFD EQVHLLDNSK N
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