Gene Sputcn32_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2253 
Symbol 
ID5080225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2597587 
End bp2598912 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content41% 
IMG OID640499415 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001183773 
Protein GI146293349 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCT CGCTTAAAAA TAAACTCGGT CTCACAAGCA AAATTCTGTT AGGTATGGCA 
AGTGGTATTC TCTTTGGACT TTTGCTTCGT AGCGCTTTCC CTGAAAGTGT GTTTGTGAAA
GATTATATAA CCGAAGGTTT TTTGCATGTT ATCGGCACTA TTTTTATCTC TAGTTTAAAA
ATGTTAGTGG TACCTTTAGT GTTTATCTCT CTCGTTTGTG GGACATGCTC ACTCAGTGAA
CCATCAAAAC TCGGCCGTTT AGGTGGCAAA ACATTAGCCT TTTACTTATT TACAACTGCA
ATTGCTTTAA CTATCGCAAT TATCAGTGCA GTGATTGTTC ATCCAGGTAA CGCATCGTTA
GCTACAGAAA AAATGCACTA TGTTGCTAAG GATGCACCTG GATTAGCTGA TGTATTAATT
AGCATAGTGC CAACCAATCC GATGCAAGCA ATGAGTGAAG GAAATATGCT GCAAATTATT
ATATTTGCAG TGATTTTCGG ATTTGCTATT GCGCATATTG GTGAGCGAGG TAAGCGAGTT
GCCGTATTAT TTGAAGATTT AAATGAAGTG ATAATGCGCG TCGTTACCTT AATTATGCAG
TTAGCACCTT ACGGTGTATT TGCGCTGATG GGAAAACTCG CATTAACCTT AGGTCTTGAG
ACTTTTGGAA GTGTCGTAAA ATACTTCTTT GTAGTACTCG TTGTATTATT AGTCCATGCC
TTTGTTGTCT ACCCAATGTT ACTCAAGCTT CTCTCGGGGC TAAACCCGCT TATCTTTATT
CGCAAAATGC GCGATGTGCA GCTTTTTGCA TTTTCAACGG CAAGTTCAAA TGCAACCCTA
CCGATTACAA TTGAAGCTTC TGAACACAGA TTAGGTGTCG ATAATAAAAT AGCCTCTTTC
ACTCTCCCCC TTGGTGCAAC CATCAATATG GATGGCACCG CAATTATGCA AGGTGTCGCC
ACGGTATTTA TCGCCCAAGT GTTTGGAATT GAATTAACAC TGACCGATTA TGCCGCCGTT
GTAGTCACAG CAACTCTGGC ATCTATCGGC ACGGCAGGAG TACCTGGTGT CGGTCTTATT
ATGCTGGCCA TGGTTCTCAA TCAAGTGGGT TTACCTGTAG AAGGTATCGC ATTGATCATT
GGTGTTGACC GCTTACTCGA TATGGTGCGT ACCGCCGTTA ACGTTACCGG TGATTGTGTC
GCCACTGTTG TGATAGCTAA ATCTGAAGGC GAATTTAATG AAACTGTGTT TAATAACACT
CAAGCAGGGA AAGTTGCACG AAGCTTTGAT GAACAAGTAC ACCTACTGGA TAATTCAAAA
AACTAG
 
Protein sequence
MATSLKNKLG LTSKILLGMA SGILFGLLLR SAFPESVFVK DYITEGFLHV IGTIFISSLK 
MLVVPLVFIS LVCGTCSLSE PSKLGRLGGK TLAFYLFTTA IALTIAIISA VIVHPGNASL
ATEKMHYVAK DAPGLADVLI SIVPTNPMQA MSEGNMLQII IFAVIFGFAI AHIGERGKRV
AVLFEDLNEV IMRVVTLIMQ LAPYGVFALM GKLALTLGLE TFGSVVKYFF VVLVVLLVHA
FVVYPMLLKL LSGLNPLIFI RKMRDVQLFA FSTASSNATL PITIEASEHR LGVDNKIASF
TLPLGATINM DGTAIMQGVA TVFIAQVFGI ELTLTDYAAV VVTATLASIG TAGVPGVGLI
MLAMVLNQVG LPVEGIALII GVDRLLDMVR TAVNVTGDCV ATVVIAKSEG EFNETVFNNT
QAGKVARSFD EQVHLLDNSK N