Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2235 |
Symbol | |
ID | 5080207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2572589 |
End bp | 2573959 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499397 |
Product | adenylosuccinate lyase |
Protein accession | YP_001183755 |
Protein GI | 146293331 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0334521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTTT CCGCACTAAC TGCTATCTCT CCGGTAGACG GCCGTTATGG TAGTAAAACC GCGTCATTGA GAGGGATTTT CAGCGAGTTC GGTCTTACCA AGTACCGTGT TCAGGTTGAA ATCAATTGGT TAAAACTGTT AGCCGATTGC CCAGAAATCA TCGAAGTACC ACCGCTAAGC GAGTCAGCTA TCGCCGTGCT CGATGGCATT AAAGACAATT TCAACGAACA AGATGCGCTG CGTGTTAAGG CTATCGAAAG CACCACTAAC CACGATGTGA AAGCGGTTGA ATACTTCATC AAAGAAAAAA TCGCGGGCAA TGCCGAATTA GCTGCTGTGG GTGAGTTTGT TCACTTTGCT TGTACTTCCG AAGATATCAA CAACTTAAGC CACGGTTTAA TGTTGACTGA AGCCCGTGAG CAAGTCTTAC TGCCCTACTG CAACGAGTTG CTGACGGCAA TTAAAAAGCT GGCGATTGAA TATCGCTCTG TGCCATTAAT GTCACGTACC CATGGCCAAC CCGCGTCACC TTCGACGCTC GGTAAAGAAA TGGCGAACGT CGCAGTGCGC CTTGAACGTC AAATCAAACA AATCGCCAAT GTTGAAATCA TGGGCAAACT GAACGGTGCC GTAGGTAACT ACAATGCTCA CCTGTCAGCC TATCCAGAAG TTAATTGGCA TGAACTGTCT GAGCGTTTTG TAACAAGCCT TGGCCTTAAC TGGAATGCCT ACACGACGCA AATCGAGCCA CACGATTACA TTGCCGAATT GTTTGATGCG GTTGCCCGTT TCAACACTGT GCTGATTGAC TTTGACCGTG ATATTTGGGG TTACATCGCC CTAGGTCACT TCAAACAACG CACTATCGCC GGTGAAATCG GTTCATCGAC TATGCCGCAC AAAGTTAACC CCATCGATTT TGAAAATTCT GAAGGTAACT TAGGTATCGC TAACGCACTG ATGCAACACT TAGCCTCTAA GCTACCAGTT TCAAGATGGC AACGTGACTT AACTGACTCG ACTGTACTGC GTAACTTAGG TGTAGGTATT GCCCATGCAT TGATCGCGTA TCAAGCGACC TTAAAAGGCA TCAGCAAGTT AGAAGTTAAC GAAGCACATC TGCGTGATGA GTTAGATCAC AACTGGGAAG TGTTAGCAGA ACCCGTACAA ACGGTAATGC GTCGTTATGG CATTGAAAAG CCATACGAAA AATTAAAAGA ACTGACGCGC GGTAAACGTA TCGACGCGCA GCAACTGTCA GTGTTTATTG ACGGACTTGA ATTACCAGAC TCAGTGAAAG CTGAACTGAA GAAAATGACG CCAGCCAATT ACATTGGTCG CGCCGAAACG TTTGTCGACG AACTGAAGTA A
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Protein sequence | MDLSALTAIS PVDGRYGSKT ASLRGIFSEF GLTKYRVQVE INWLKLLADC PEIIEVPPLS ESAIAVLDGI KDNFNEQDAL RVKAIESTTN HDVKAVEYFI KEKIAGNAEL AAVGEFVHFA CTSEDINNLS HGLMLTEARE QVLLPYCNEL LTAIKKLAIE YRSVPLMSRT HGQPASPSTL GKEMANVAVR LERQIKQIAN VEIMGKLNGA VGNYNAHLSA YPEVNWHELS ERFVTSLGLN WNAYTTQIEP HDYIAELFDA VARFNTVLID FDRDIWGYIA LGHFKQRTIA GEIGSSTMPH KVNPIDFENS EGNLGIANAL MQHLASKLPV SRWQRDLTDS TVLRNLGVGI AHALIAYQAT LKGISKLEVN EAHLRDELDH NWEVLAEPVQ TVMRRYGIEK PYEKLKELTR GKRIDAQQLS VFIDGLELPD SVKAELKKMT PANYIGRAET FVDELK
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