| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2233 |
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| Symbol | mnmA |
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| ID | 5080205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2570820 |
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| End bp | 2571938 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640499395 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001183753 |
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| Protein GI | 146293329 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000103547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAA TCGAACCCAC TCATACAGGA AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT
GTAGATTCAT CTGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT
TTCATGAAGA ACTGGGAAGA AGATGACAAC AACGAGTACT GCGCCGCCGC TGAAGATTTA
AAAGATGCCC AAGCCGTGTG CGACAAGCTC GGGATCAAGC TACACACAGT CAACTTTGCT
GCTGAATATT GGGACAATGT ATTTGAGTAT TTCCTCGCCG AATACAAAGC GGGCCGCACG
CCAAATCCCG ATATTATGTG CAACAAAGAA ATCAAGTTTA AGGCATTTTT AGAATTTGCC
GATGAAATCC TCGACGCCGA TTACATCGCC ATGGGCCACT ATGTTCGCCG TCGCGACAAT
AGCGACGGCA GTACGCAAAT GCTCCGCGGC GTTGATGGCA ATAAAGATCA AAGTTATTTC
CTCTACACCT TAAGCCACGA GCAAGTGGCA CGTAGCCTGT TCCCTGTCGG TGAGCTTGAA
AAACATCAAG TGCGTGAAAT AGCGAAAGAA ATGGGCTTAA TCACCCATGA TAAAAAAGAC
AGCACCGGTA TCTGCTTTAT CGGTGAGCGC AAATTTACTG AATTTCTAAG GACTTATTTA
CCGGCGCAGC CTGGCAATAT CGAAACACCA GAAGGTGAAG TCATAGGCAC GCACCAAGGA
CTCATGTACC ACACCTTAGG CCAACGTAAA GGCTTAGGCA TTGGCGGCAT GAAAAACAGC
AATGACGATC CTTGGTATGT GGTCGATAAA GATCTTGAGC GTAACGTATT GATTGTGGGT
CAAGGCGGAC ACCATCCCCG TTTGATGTCG ACCGGCATGA CAGTTAACCA ACTGCATTGG
GTGGATAGAA CTGGCCCTGT CGATGGTTGT CATATCACCG TCAAAACCCG TTATCGCCAA
CAAGATGTGC CTTGCACATT AACCTACACA GATGAACACA CCTTGCGTGT GGTCTTCGAT
GAACCTGTAG CGGCGGTGAC GCCTGGACAG TCTGCGGTAT TTTATGATGG TGAAGTCTGC
CTAGGTGGCG GCATTATCGA TCAATTAATC CGAGGGTAA
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| Protein sequence | MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL FMKNWEEDDN NEYCAAAEDL
KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT PNPDIMCNKE IKFKAFLEFA
DEILDADYIA MGHYVRRRDN SDGSTQMLRG VDGNKDQSYF LYTLSHEQVA RSLFPVGELE
KHQVREIAKE MGLITHDKKD STGICFIGER KFTEFLRTYL PAQPGNIETP EGEVIGTHQG
LMYHTLGQRK GLGIGGMKNS NDDPWYVVDK DLERNVLIVG QGGHHPRLMS TGMTVNQLHW
VDRTGPVDGC HITVKTRYRQ QDVPCTLTYT DEHTLRVVFD EPVAAVTPGQ SAVFYDGEVC
LGGGIIDQLI RG
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