Gene Sputcn32_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2230 
Symbol 
ID5080352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2566691 
End bp2568916 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content48% 
IMG OID640499392 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_001183750 
Protein GI146293326 
COG category[C] Energy production and conversion 
COG ID[COG2838] Monomeric isocitrate dehydrogenase 
TIGRFAM ID[TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.23954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA ACTCATCAAC AATTATTTAC ACTGAAACAG ACGAAGCGCC AGCACTGGCC 
ACCCTCTCAC TCTTACCTAT TATCAGAACG TTTACCGACG CCGCGGGCGT TGCGGTTGAA
ACCCGTGATA TCTCGTTATC GGGCCGTATT ATTGCCAGTT TCCCTGAGCA ACTGACCGAA
GCACAAAAGA TTGGCGACCA TCTGACAGAG CTTGGCGAGT TAGCTAATCA GCCAGAAGCG
AACATCATCA AGTTACCGAA TATCAGTGCT TCGATCCCAC AATTAAAAGC CTGTATCCTT
GAACTGCAGC AAAAAGGTTA CGACATTCCT AATTATCCGG ATGAGCCAAA AACCGACGCT
GAAAAGTCAA TTAAAGCCCG TTACGACAAG ATCAAAGGCA GTGCGGTAAA CCCAGTACTG
CGTGAAGGTA ATTCAGATCG CCGCGCGCCA TTATCGGTGA AAAACTTTGC CAAGAAAAAC
CCGCATTCCA TGGGGAAATG GGCTAAGGAT TCTAAGTCAC ACGTTGCCCA CATGACTGAC
GGTGATTTCT ACGGCAGCGA GCAGTCTGTC ACTTTATCTG ATGCGGGCAG TGTGAATATC
GTGCTGACGC AAAAAGATGG TCAAGAAGTG GTGCTCAAGT CGGGTCTTAA GCTGCTGGCT
GGCGAAATTA TCGATGCTGC GGTATTGAGT AAAAAAGCCT TAGTGAGCTT CTATGAGCGT
GAAATCGAAA ACGCCAAAGC TGAAGATGTG CTGTTATCGC TGCATCTCAA AGCCACTATG
ATGAAAGTGT CTGATCCTAT TATGTTTGGT CACGCAGTGA AGGTATTCTT TAAGCCAGTA
TTTGACAAAC ATGCGGCGCT TTTCGCTGAA TTAGGCGTAG ATGTTAACAA CGGTTTTGGT
GATGTTTATG CCAAGATCGC GACATTACCT GCCGACAGCC GCGCCGAAGT CGAAGCCGAT
ATCGCCGCCG TTTACGCTGC GCGTCCCGCA TTGGCCATGG TTGATTCTGA CAAAGGTATC
ACCAACTTAC ACGTGCCAAG CGACATCATT ATCGATGCGT CTATGCCCGC TGCGATTCGT
TCATCTGGCC AAATGTGGGG ACCAGACGGT CAACTGCATG ACACTAAAGC CATGATCCCC
GATCGTTGCT ATGCGGGTAT TTACCAAGAA ACGATTGCTT TCTGTAAAGA GCACGGCGCT
TTCGATCCTA AAACCATGGG CAGTGTACCC AACGTCGGCT TGATGGCGCA AAAAGCGGAA
GAGTACGGCA GCCACGATAA GACCTTTGAA ATTCCTGCTG ACGGTGTGGT CAACGTTGTT
GATGCCAGCG GTAAGGTATT GATGAGCCAT AACGTGGAAG CGGGCGATAT CTGGAGAATG
TGTCAAGTTA AAGACGCACC TATCCGTGAT TGGGTCAAAC TGGCCGTGCG CCGTGCCCGT
TTAAGCAATA CTCCAGCGGT ATTTTGGTTA GATAGCAAAC GTGCCCACGA TGCACAAATC
ATTGCTAAAG TGCAGCAGTA TCTGCCAGAG CATGATACTG ATGGCTTAGA GATCAGCATT
ATGTCTCCTG AAGAGGCAAC GCGTTTCTCT TTGGCTCGTA TCAAAGAAGG TAAAGATACG
ATTTCAGTTA CGGGTAACGT TTTACGTGAC TACCTGACTG ACTTGTTCCC CATCCTCGAG
CTAGGCACCA GTGCCAAAAT GCTGTCAATT GTTCCATTAA TGAACGGCGG CGGTCTATTT
GAAACAGGTG CGGGCGGTAG TGCACCTAAA CACGTGCAAC AGCTTGAGAA AGAAGGTCAC
TTACGTTGGG ATTCGCTCGG TGAATTCTTG GCTCTGGCGG CGTCTCTTGA GCATTTAAGT
CAAACCGTAG GCAATCCAAA AGCCCAAGTA TTGGCAGATA CCTTAGATCA AGCCATTGGC
CAATTCTTAG ATAGCAACAA ATCGCCATCA AGAAGAGTCG GTGAGCTGGA TAACCGTGGC
AGTCATTTCT ACTTAGCCAT GTACTGGGCC CAAGCCTTAG CTGCGCAAAC GGGCGATGAG
CAACTACAAG CACACTTTAT TCCTTTGGCG CATGCGCTGG CTGCGAATGA GCAAGTCATT
GTGGCTGAAT TAGCAAATGC ACAAGGTGCG TCTGTCGATT TAGGCGGTTA TTACCGTTTA
GATGCGGCTA AGGCTGAAAA AGCCATGCGC CCAAGCGAGA CGTTAAACAA ACTGTTGATT
GCTTAA
 
Protein sequence
MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI IASFPEQLTE 
AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP NYPDEPKTDA
EKSIKARYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWAKD SKSHVAHMTD
GDFYGSEQSV TLSDAGSVNI VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER
EIENAKAEDV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHAALFAE LGVDVNNGFG
DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA FDPKTMGSVP NVGLMAQKAE
EYGSHDKTFE IPADGVVNVV DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR
LSNTPAVFWL DSKRAHDAQI IAKVQQYLPE HDTDGLEISI MSPEEATRFS LARIKEGKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQLEKEGH
LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG
SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI VAELANAQGA SVDLGGYYRL
DAAKAEKAMR PSETLNKLLI A