| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2227 |
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| Symbol | |
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| ID | 5080349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2563351 |
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| End bp | 2565618 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499389 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001183747 |
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| Protein GI | 146293323 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0179125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACA AAGATCTGGA AGTCACCTTA AATCTGGCGT TTCAGCAAGC CAGAGACGCG
CGTCACGAGT ATATGACAGT GGAACATCTG TTATTAGCTC TCATCGACAA TCCAGCGGCT
CAAGAAGCGT TAATCGCCTG TGGAGCGAAT CTAGATAAAC TCAGAGATGA AGTGGCAAGC
TTTATCCAAC AAACAACCCC AATCATTGCC GATATTGATG ATGACAAAGA AACTCAGCCG
ACGCTTGGGT TCCAGCGAGT GCTGCAACGG GCAGTATTCC ATGTGCAGTC ATCGGGCCGC
AATGAAGTGA ACGGCGCTAA CGTTTTAGTC GCTATTTTCA GCGAACAAGA ATCCCAAGCC
GTGTACTTGC TGCGCCGTTG CGATATTAGT CGCCTAGACG TAGTGAATTT TATTTCCCAT
GGTTTCGCCA AAAATGATGA TGCTGAGTCA CATCAAGATC AAGAACGCAT AGAAGATCAA
AGTGAAGGCA GTGAAGAACG CAGCATGTTG TCGCAATTTG CGGCCAACTT AAACCAACTT
GCAAAGCAAG GGATTATTGA TCCACTGATT GGCCGCGATC AGGAAATTGA GCGCGCGATT
CAAACCCTGT GCCGTCGCCG TAAAAATAAT CCACTGTTAG TGGGTGAGGC GGGTGTGGGG
AAAACGGCGA TTGCCGAAGG GCTGGCGTAT CGGATTGTGA ATAAACAAGT GCCCGATGTA
ATGCTTGAAG CCACGGTATA TTCCTTGGAT TTAGGTTCAT TGCTTGCAGG CACTAAGTAT
CGCGGCGACT TTGAAAAACG CTTTAAGAAT CTGTTAAAAG AACTGGCGGC GGATAAGCAT
GCCATCCTAT TCATCGATGA GATCCACACC ATTATCGGTG CGGGCGCGGC CTCTGGCGGC
GTAATGGATG CCTCTAATCT GCTGAAACCT TTGCTATCTA GCGGTAATTT GCGCTGCATG
GGCTCGACGA CTTTCCAAGA ATATCAAAGT ATTTTTGAGA AAGACCGTGC GCTGGCACGT
CGTTTCCAAA AGGTGGATAT TAATGAGCCT TCAGTGGAAG AAACCACTAA GATTTTGATG
GGGCTTAAGT CTAAATACGA AGAATATCAT GGCGTTCGTT ATACTCAGGC CGCGATTAGC
AGCGCTGCAG TATTATCGGC CAAGCACATT AATGACAGAC ATTTACCCGA TAAAGCTATC
GATGTTATCG ATGAAGCGGG GGCTCGTATG GTGATGTTGC CTATGAGCAA GCGTAAAAAG
ACCATAGGCC AAGCCGAAAT TGAGTCCATT GTAGCTAAAA TGGCGCGCAT CCCTGAGAAG
TCAGTATCTG CCACAGATAA GGACTTACTG CGTAATCTTG AGCGTAACCT TAAGATGGTG
GTCTTTGGTC AAGATAAAGC CATTGAGACC TTAAGCTCAG CCATTCGTTT ATCGCGAAGT
GGTTTGGGCA CAGATAAAAA ACCTGTCGGC AGTTTCTTAT TCGCCGGTCC CACTGGTGTG
GGTAAAACCG AGGTTACCAA TCAACTGGCT ACCTGTTTAG GGATGAAACT GGTGCGCTTT
GATATGTCGG AGTACATGGA AAGCCACACA GTGTCACGCT TAATTGGGGC ACCTCCAGGT
TATGTGGGTT ATGACCAAGG TGGATTGCTG ACAGATGCTG TGATTAAAAA TCCGCACTGT
GTCGTGCTAT TGGATGAAAT TGAGAAGGCC CACCGTGATG TCTATAACTT GCTGTTGCAG
GTGATGGACC ACGGCACTTT GACCGATAAT AATGGTCGTA AGGCTGACTT CAGACACGTG
ACTTTGGTGA TGACCACTAA CGCGGGGGTA CAGGAGACTA TTCGTAAGTC GATTGGCTTT
ACCCAGCAAG ATCATACCCA AGATGCGTTA TCTGAAATTA ATCGAGTATT TTCGCCAGAA
TTTCGAAATC GTCTCGATTC CATCATTTGG TTCAACCATT TGGATATGAC GATTATTGCC
AAAGTGGTCG ATAAATTCTT GGTGGAATTA CAGGCTCAGT TGGATGCAAA ACACGTCATC
TTGGACGTCA GCGACGAAGC CAGAACCTTA CTCGCCGAGA AAGGCTACGA TAAGAACATG
GGCGCGCGTC CAATGGCTCG GGTCGTGACC GAATTGATCA AACGTCCATT AGCGGATGAG
ATTTTATTTG GTGCCTTAGA GTCGGGTGGT GTGGCTTACG TGGATGTCAA AGAGGGTGAA
ATTGCTATTC GCACAGAGCG TCATGAAAAA GTGGCTTCTA AGGCTTAA
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| Protein sequence | MLNKDLEVTL NLAFQQARDA RHEYMTVEHL LLALIDNPAA QEALIACGAN LDKLRDEVAS
FIQQTTPIIA DIDDDKETQP TLGFQRVLQR AVFHVQSSGR NEVNGANVLV AIFSEQESQA
VYLLRRCDIS RLDVVNFISH GFAKNDDAES HQDQERIEDQ SEGSEERSML SQFAANLNQL
AKQGIIDPLI GRDQEIERAI QTLCRRRKNN PLLVGEAGVG KTAIAEGLAY RIVNKQVPDV
MLEATVYSLD LGSLLAGTKY RGDFEKRFKN LLKELAADKH AILFIDEIHT IIGAGAASGG
VMDASNLLKP LLSSGNLRCM GSTTFQEYQS IFEKDRALAR RFQKVDINEP SVEETTKILM
GLKSKYEEYH GVRYTQAAIS SAAVLSAKHI NDRHLPDKAI DVIDEAGARM VMLPMSKRKK
TIGQAEIESI VAKMARIPEK SVSATDKDLL RNLERNLKMV VFGQDKAIET LSSAIRLSRS
GLGTDKKPVG SFLFAGPTGV GKTEVTNQLA TCLGMKLVRF DMSEYMESHT VSRLIGAPPG
YVGYDQGGLL TDAVIKNPHC VVLLDEIEKA HRDVYNLLLQ VMDHGTLTDN NGRKADFRHV
TLVMTTNAGV QETIRKSIGF TQQDHTQDAL SEINRVFSPE FRNRLDSIIW FNHLDMTIIA
KVVDKFLVEL QAQLDAKHVI LDVSDEARTL LAEKGYDKNM GARPMARVVT ELIKRPLADE
ILFGALESGG VAYVDVKEGE IAIRTERHEK VASKA
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